University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q46798
Original Database ID tr C1ND68
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation uug start
Sequence Length 259

Dataset Information:

The newest dataset for this sequence was created on 2010-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region66-252
Protein Length259
Template PDB Code2gu1A
Template Region144-331
Sequence Identity24%
E-Value4e-33
GA3410.46
Datasetnysgxrc_2gu1_706
ModPipe VersionModPipe1.0
Model Date2006-07-13

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2gu1crystal structure of a zinc containing peptidase from vibrio cholerae
DBALI2gu1A 
JenaImageLibrary2gu1 
Target Sequence
UniProtKBJ7RUQ1SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CCK48151.1};
InterProJ7RUQ1 
PFAMJ7RUQ1 
ProdomJ7RUQ1 
UniProtKBJ7QH75SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CCJ45465.1};
InterProJ7QH75 
PFAMJ7QH75 
ProdomJ7QH75 
UniProtKBC1ND68SubName: Full=Peptidase;
InterProC1ND68 
PFAMC1ND68 
ProdomC1ND68 
UniProtKBQ46798UUG START
InterProQ46798 
PFAMQ46798 
ProdomQ46798 
UniProtKBC1ND68SubName: Full=Peptidase;
InterProC1ND68 
PFAMC1ND68 
ProdomC1ND68 
RefSeqZP_04871966.1 peptidase [Escherichia sp. 1_1_43]
GenPept16130767 (NC_000913) putative lipoprotein [Escherichia coli K12]
GenPept887815UUG start
GenPept7448010A65070 hypothetical protein b2865 - Escherichia coli (strain K-12)
GenPept412970813putative lipoprotein
GenPept412964223putative lipoprotein
GenPept254037908 peptidase [Escherichia sp. 1_1_43]
GenPept226839532peptidase
GenPept1789228putative lipoprotein; putative lipoprotein, outer membrane
GenBankEEH71553.1 peptidase [Escherichia sp. 1_1_43]
GenBankAAA83046.1 UUG start [Escherichia coli]