University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P28827
Original Database ID gi 131569
Organism Homo sapiens
Annotation recname: full=receptor-type tyrosine-protein
phosphatase mu;short=protein-tyrosi
ne phosphatase mu;short=r-ptp-mu;ec=3.1.3.48;flags:
precursor;
Sequence Length 1452

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region882-1451
Protein Length1452
Template PDB Code1larA
Template Region1308-1875
Sequence Identity46%
E-Value1e-149
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-Mut Somatic mutation found in glioblastoma multiforme for CCDS11840.1 M1220V
Template Structure
PDB1larcrystal structure of the tandem phosphatase domains of rptp lar ; EC: 3.1.3.48 ; PFAM: PF00102 ; SCOP: 32693 32694
DBALI1larA 
CATH3.90.190.10 Domain: 1larA01 Protein tyrosine phosphatase superfamily (100%)
CATH3.90.190.10 Domain: 1larA02 Protein tyrosine phosphatase superfamily (100%)
JenaImageLibrary1lar 
Target Sequence
UniProtKBP28827RecName: Full=Receptor-type tyrosine-protein phosphatase mu;Short=Protein-tyrosine phosphatase mu;Short=R-PTP-mu;EC=3.1.3.48;Flags: Precursor;
InterProP28827 
PFAMP28827 
ProdomP28827 
GenPept107511S17669 protein-tyrosine-phosphatase (EC 3.1.3.48), receptor type mu precursor - human
GenPept131569PTPM_HUMAN PROTEIN-TYROSINE PHOSPHATASE MU PRECURSOR (R-PTP-MU)
GenPept32456protein-tyrosine phosphatase
GenPept4506319 protein tyrosine phosphatase, receptor type, mu polypeptide [Homo sapiens]
GenPept5939129Sequence 8 from patent US 5856162
EMBLCAA41226.1 
UCSCGenomeBrowserP28827