University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q5W9G2
Original Database ID gi 54633198
Organism Homo sapiens
Annotation subname: full=lar;flags: fragment;
Sequence Length 1918

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region14-336
Protein Length1918
Template PDB Code1bihA
Template Region72-395
Sequence Identity19%
E-Value2e-15
GA3410.98
DatasetSP/TR-update2
ModPipe VersionModPipe1.0
Model Date2005-06-01

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1bihcrystal structure of the insect immune protein hemolin: a new domain arrangement with implications for homophilic adhesion ; PFAM: PF00047 ; SCOP: 21752 21753 21754 21755
DBALI1bihA 
CATH2.60.40.10 Domain: 1bihA01 Immunoglobulins (31%)
CATH2.60.40.10 Domain: 1bihA02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1bihA03 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1bihA04 Immunoglobulins (100%)
JenaImageLibrary1bih 
Target Sequence
UniProtKBQ5W9G2SubName: Full=LAR;Flags: Fragment;
InterProQ5W9G2 
PFAMQ5W9G2 
ProdomQ5W9G2 
GenPept54633198LAR