University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 55669648
Original Database ID UP P25524
Organism Escherichia coli
Annotation a chain a, bacterial cytosine
deaminase d314g mutant bound to
5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Sequence Length 430

Dataset Information:

The newest dataset for this sequence was created on 2014-09-25. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region60-367
Protein Length430
Template PDB Code1qw7A
Template Region66-360
Sequence Identity12%
E-Value24
GA3410.18
DatasetAH_1QW7A
ModPipe VersionModPipe1.0
Model Date2005-02-05

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qw7structure of an engineered organophosphorous hydrolase with increased activity toward hydrolysis of phosphothiolate bonds
DBALI1qw7A 
CATH3.20.20.140 Domain: 1qw7A00 Metal-dependent hydrolases (88%)
JenaImageLibrary1qw7 
Target Sequence
SFLD55669648Structure Function Linkage Database entry: Member of the Amidohydrolase superfamily.
PDB1R9XA Chain A, Bacterial Cytosine Deaminase D314g Mutant.
PDB1R9XAChain A, Bacterial Cytosine Deaminase D314g Mutant.
PDB1RA0A Chain A, Bacterial Cytosine Deaminase D314g Mutant Bound To 5-Fluoro- 4-(S)-Hydroxy-3,4-Dihydropyrimidine
PDB1RA0AChain A, Bacterial Cytosine Deaminase D314g Mutant Bound To 5-Fluoro-4-(S)- Hydroxy-3,4-Dihydropyrimidine
GenPept55669645A Chain A, Bacterial Cytosine Deaminase D314g Mutant.
GenPept55669648A Chain A, Bacterial Cytosine Deaminase D314g Mutant Bound To 5-Fluoro-4-(S)- Hydroxy-3,4-Dihydropyrimidine