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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q8TDA3
Original Database ID EN ENSP00000314787.4
Organism Homo sapiens
Annotation guanine nucleotide exchange factor
gef-h1 (rho/rac guanine nucleotideexchange
fa ctor (gef) 2, isoform cra_c)
(rho/rac guanine nucleotideexchange
fact ...
Sequence Length 985

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region90-579
Protein Length985
Template PDB Code3ky9A
Template Region28-513
Sequence Identity16%
E-Value0
GA3411
MPQS0.596462
z-DOPE0.48
TSVMod MethodMSALL
TSVMod RMSD8.575
TSVMod NO350.534
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3ky9autoinhibited vav1
DBALI3ky9A 
JenaImageLibrary3ky9 
Target Sequence
UniProtKBQ8TDA3Guanine nucleotide exchange factor GEF-H1 (Rho/rac guanine nucleotideexchange factor (GEF) 2, isoform CRA_c) (Rho/rac guanine nucleotideexchange factor (GEF) 2).
InterProQ8TDA3 
PFAMQ8TDA3 
ProdomQ8TDA3 
RefSeqNP_001155856.1 rho guanine nucleotide exchange factor 2 isoform 2 [Homo sapiens]
GenPept119573400rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_c
GenPept55663552rho/rac guanine nucleotide exchange factor (GEF) 2
GenPept253735778 rho guanine nucleotide exchange factor 2 isoform 2 [Homo sapiens]
GenPept19744759AF486838_1 guanine nucleotide exchange factor GEF-H1
GenBankAAL96658.1AF486838_1 guanine nucleotide exchange factor GEF-H1 [Homo sapiens]
GenBankEAW53015.1 rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_c [Homo sapiens]
ENSEMBLENSP00000348720Rho/Rac guanine nucleotide exchange factor 2 (GEF-H1 protein) (Proliferating cell nucleolar antigen p40). [Homo sapiens]
EMBLCAH72630.1 
ENSEMBLENSP00000348720 
ENSEMBLENSP00000348720TDI sequence
ENSEMBLENSP00000314787 
UCSCGenomeBrowserQ8TDA3