University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9P2D1
Original Database ID gi 7243213
Organism Homo sapiens
Annotation chromodomain-helicase-dna-binding
protein 7 (chd-7) (fragment)
Sequence Length 1967

Dataset Information:

The newest dataset for this sequence was created on 2006-10-13. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region152-773
Protein Length1967
Template PDB Code1z3iX
Template Region96-729
Sequence Identity23%
E-Value 0
GA3411
MPQS0.17
z-DOPE-0.51
DatasetH.sapiens
ModPipe VersionModPipe2.0
Model Date2006-10-13

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1z3istructure of the swi2/snf2 chromatin remodeling domain of eukaryotic rad54
DBALI1z3iX 
JenaImageLibrary1z3i 
Target Sequence
UniProtKBQ9P2D1Chromodomain-helicase-DNA-binding protein 7 (CHD-7) (Fragment)
InterProQ9P2D1 
PFAMQ9P2D1 
ProdomQ9P2D1 
GenPept314516662Sequence 16 from patent US 7803382
GenPept56622274Sequence 16 from patent US 6794501
GenPept7243213KIAA1416 protein, partial
ENSEMBLENSP00000307304Chromodomain-helicase-DNA-binding protein 7 (CHD-7) (Fragment). [Homo sapiens]
UCSCGenomeBrowserQ9P2D1 
ENSEMBLENSP00000307304 
ENSEMBLENSP00000307304TDI sequence