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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2RRQ6
Original Database ID EN ENSP00000300651.6
Organism Homo sapiens
Annotation ppar binding protein.
Sequence Length 1581

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1313-1528
Protein Length1581
Template PDB Code4rksA
Template Region15-241
Sequence Identity28%
E-Value0.36
GA3410.67
MPQS0.320322
z-DOPE-0.07
TSVMod MethodMSALL
TSVMod RMSD7.233
TSVMod NO350.629
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4rks
DBALI4rksA 
JenaImageLibrary4rks 
Target Sequence
UniProtKBQ9HD39RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ9HD39 
PFAMQ9HD39 
ProdomQ9HD39 
UniProtKBQ15648RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ15648 
PFAMQ15648 
ProdomQ15648 
UniProtKBA2RRQ6RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProA2RRQ6 
PFAMA2RRQ6 
ProdomA2RRQ6 
UniProtKBO43810RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProO43810 
PFAMO43810 
ProdomO43810 
UniProtKBQ6P9H7RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ6P9H7 
PFAMQ6P9H7 
ProdomQ6P9H7 
UniProtKBQ6PK58RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ6PK58 
PFAMQ6PK58 
ProdomQ6PK58 
UniProtKBO75447RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProO75447 
PFAMO75447 
ProdomO75447 
UniProtKBA2RRQ6PPAR binding protein.
InterProA2RRQ6 
PFAMA2RRQ6 
ProdomA2RRQ6 
UniProtKBO75447RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProO75447 
PFAMO75447 
ProdomO75447 
UniProtKBQ15648.4MED1_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit 1; AltName: Full=Activator-recruited cofactor 205 kDa component; Short=ARC205; AltName: Full=Mediator complex subunit 1; Al
InterProQ15648.4 
PFAMQ15648.4 
ProdomQ15648.4 
UniProtKBQ6P9H7RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ6P9H7 
PFAMQ6P9H7 
ProdomQ6P9H7 
UniProtKBO43810RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProO43810 
PFAMO43810 
ProdomO43810 
UniProtKBA2RRQ6RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProA2RRQ6 
PFAMA2RRQ6 
ProdomA2RRQ6 
UniProtKBQ6PK58RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ6PK58 
PFAMQ6PK58 
ProdomQ6PK58 
UniProtKBQ9HD39RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ9HD39 
PFAMQ9HD39 
ProdomQ9HD39 
UniProtKBQ15648RecName: Full=Mediator of RNA polymerase II transcription subunit 1;AltName: Full=Activator-recruited cofactor 205 kDa component;Short=ARC205;AltName: Full=Mediator complex subunit 1;AltName: Full=Per
InterProQ15648 
PFAMQ15648 
ProdomQ15648 
RefSeqNP_004765.2 mediator of RNA polymerase II transcription subunit 1 [Homo sapiens]
PDB7ENJAMediator of RNA polymerase II transcription subunit 1
PDB7ENCaMediator of RNA polymerase II transcription subunit 1
PDB7ENAaMediator of RNA polymerase II transcription subunit 1
PDB7EMFAMediator of RNA polymerase II transcription subunit 1
GenPept119580979PPAR binding protein
GenPept568527122Sequence 628 from patent US 8586006
GenPept28559039 mediator of RNA polymerase II transcription subunit 1 [Homo sapiens]
GenPept158518535MED1_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit 1; AltName: Full=Activator-recruited cofactor 205 kDa component; Short=ARC205; AltName: Full=Mediator complex subunit 1; Al
GenPept124298020Mediator complex subunit 1
GenBankEAW60575.1 PPAR binding protein [Homo sapiens]
GenBankAAI31784.1 Mediator complex subunit 1 [Homo sapiens]
ENSEMBLENSP00000300651Peroxisome proliferator-activated receptor binding protein (PBP) (PPAR binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor interacting
ENSEMBLENSP00000300651 
ENSEMBLENSP00000300651TDI sequence
ENSEMBLENSP00000300651