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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q5H9U5
Original Database ID EN ENSP00000350676.5
Organism Homo sapiens
Annotation recname: full=histone lysine demethylase
phf8;ec=1.14.11.27;altname: full=phd
fi nger protein 8;
Sequence Length 1060

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region39-483
Protein Length1060
Template PDB Code3kv4A
Template Region3-447
Sequence Identity100%
E-Value0
GA3411
MPQS1.62101
z-DOPE-1.42
TSVMod MethodMSALL
TSVMod RMSD0.674
TSVMod NO350.952
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3kv4structure of phf8 in complex with histone h3
DBALI3kv4A 
JenaImageLibrary3kv4 
Target Sequence
UniProtKBQ9HAH2RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ9HAH2 
PFAMQ9HAH2 
ProdomQ9HAH2 
UniProtKBQ7Z6D4RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ7Z6D4 
PFAMQ7Z6D4 
ProdomQ7Z6D4 
UniProtKBQ5VUJ4PHD finger protein 8
InterProQ5VUJ4 
PFAMQ5VUJ4 
ProdomQ5VUJ4 
UniProtKBQ9UPP1.3PHF8_HUMAN RecName: Full=Histone lysine demethylase PHF8; AltName: Full=PHD finger protein 8
InterProQ9UPP1.3 
PFAMQ9UPP1.3 
ProdomQ9UPP1.3 
UniProtKBQ5JPR9RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ5JPR9 
PFAMQ5JPR9 
ProdomQ5JPR9 
UniProtKBQ5VUJ4RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ5VUJ4 
PFAMQ5VUJ4 
ProdomQ5VUJ4 
UniProtKBQ7Z6D4RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ7Z6D4 
PFAMQ7Z6D4 
ProdomQ7Z6D4 
UniProtKBQ9HAH2RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ9HAH2 
PFAMQ9HAH2 
ProdomQ9HAH2 
UniProtKBQ9UPP1RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ9UPP1 
PFAMQ9UPP1 
ProdomQ9UPP1 
UniProtKBQ5H9U5RecName: Full=Histone lysine demethylase PHF8;EC=1.14.11.27;AltName: Full=PHD finger protein 8;
InterProQ5H9U5 
PFAMQ5H9U5 
ProdomQ5H9U5 
RefSeqNP_001171825.1 histone lysine demethylase PHF8 isoform 1 [Homo sapiens]
GenPept168278807PHD finger protein 8, partial
GenPept296531349 histone lysine demethylase PHF8 isoform 1 [Homo sapiens]
GenPept55665694PHD finger protein 8
GenPept57209878PHD finger protein 8
GenPept57210097PHD finger protein 8
GenPept73620986PHF8_HUMAN RecName: Full=Histone lysine demethylase PHF8; AltName: Full=PHD finger protein 8
GenPept929654257KIAA1111 protein
EMBLCAH70724.1 
EMBLCAI41576.1 
EMBLCAI42860.1 
ENSEMBLENSP00000350676