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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P15822
Original Database ID ENSG00000095951 Zinc
Organism Homo sapiens
Annotation recname: full=zinc finger protein
40;altname: full=human immunodeficiency
virus type i enhancer-binding
protein 1;short=hiv-ep1;altname:
full=major h ...
Sequence Length 2717

Dataset Information:

The newest dataset for this sequence was created on 2008-07-30. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2113-2142
Protein Length2717
Template PDB Code3znfA
Template Region1-30
Sequence Identity97%
E-Value 1.2e-11
GA3411
MPQS1.1
z-DOPE-0.32
DatasetHIV_Sequences
ModPipe Versionsvn-r432
Model Date2008-07-30

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3znfhigh-resolution three-dimensional structure of a single zinc finger from a human enhancer binding protein in solution ; PFAM: PF00096 ; SCOP: 45049
DBALI3znfA 
JenaImageLibrary3znf 
Target Sequence
UniProtKBQ5VW60SubName: Full=Immunodeficiency virus type I enhancer binding protein 1;
InterProQ5VW60 
PFAMQ5VW60 
ProdomQ5VW60 
UniProtKBQ5VW60RecName: Full=Zinc finger protein 40;AltName: Full=Human immunodeficiency virus type I enhancer-binding protein 1;Short=HIV-EP1;AltName: Full=Major histocompatibility complex-binding protein 1;Short=M
InterProQ5VW60 
PFAMQ5VW60 
ProdomQ5VW60 
UniProtKBQ14122RecName: Full=Zinc finger protein 40;AltName: Full=Human immunodeficiency virus type I enhancer-binding protein 1;Short=HIV-EP1;AltName: Full=Major histocompatibility complex-binding protein 1;Short=M
InterProQ14122 
PFAMQ14122 
ProdomQ14122 
UniProtKBP15822RecName: Full=Zinc finger protein 40;AltName: Full=Human immunodeficiency virus type I enhancer-binding protein 1;Short=HIV-EP1;AltName: Full=Major histocompatibility complex-binding protein 1;Short=M
InterProP15822 
PFAMP15822 
ProdomP15822 
GenPept55662194human immunodeficiency virus type I enhancer binding protein 1
GenPept56208221human immunodeficiency virus type I enhancer binding protein 1
GenPept55957264human immunodeficiency virus type I enhancer binding protein 1
GenPept55665137human immunodeficiency virus type I enhancer binding protein 1
EMBLCAH73982.1 
EMBLCAH73909.1 
EMBLCAI21070.1 
EMBLCAI14768.1