University of California San Francisco
|
About UCSF
|
UCSF Benioff Children's Hospital San Francisco
ModBase: Database of Comparative Protein Structure Models
Sali Lab Home
ModWeb
ModLoop
ModBase
ModEval
PCSS
FoXS
IMP
ModPipe
ModBase Home
ModBase Datasets for User:Anonymous
User Login
Help
News
Contact
Current Datasets
Model Details Page: SNP Information
Sequence Information
Primary Database Link
Q86XQ4
Original Database ID
TR Q86XQ4
Organism
Homo sapiens
Annotation
pap-2-like protein 2.
Sequence Length
719
SNP Information
Perform action on this model
:
Alignment File (PIR Format)
Legacy Chimera (Structure/Alignment)
ChimeraX (Structure/Alignment)
Coordinate File (PDB)
Select option
Model Details (graphical)
Model Overview
Sequence Overview
Go to SNP View
SNP View
Genome
Browser
Residue
AA-Residue
Variants
Interface
Ligand
Stability
Validated
rs1540615
I194
IT
rs3746139
A246
AT
rs351993
P297
PS
5 SNPs found but only 3 displayed. (SNPs in modeled regions)
Sequence Model Coverage summary
for all models of this sequence
Cross-references
Show obsolete/secondary identifiers
Mutation Data
LS-SNP
SNP Information available through LS-SNP
Template Structure
PDB
1d2t
crystal structure of acid phosphatase from escherichia blattae ; EC:
3.1.3.2
; PFAM:
PF01569
; SCOP:
19052
DBALI
1d2tA
CATH
1.20.144.10
Domain: 1d2tA00 Vanadium-containing Chloroperoxidase, domain 1 (65%)
JenaImageLibrary
1d2t
Target Sequence
UniProtKB
Q86XQ4
PAP-2-like protein 2.
InterPro
Q86XQ4
PFAM
Q86XQ4
Prodom
Q86XQ4
GenPept
29468118
AF357888_1 PAP-2-like protein 2
GenBank
AAO85401.1
AF357888_1 PAP-2-like protein 2 [Homo sapiens]
UCSCGenomeBrowser
Q86XQ4