University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B1XBE0.1
Original Database ID ref NP_414556.1
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation dnaj_ecodh recname: full=chaperone
protein dnaj
Sequence Length 376

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2-348
Protein Length376
Template PDB Code4j80A
Template Region3-269
Sequence Identity42%
E-Value0
GA3411
MPQS1.05657
z-DOPE0.88
TSVMod MethodMSALL
TSVMod RMSD8.615
TSVMod NO350.618
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4j80
DBALI4j80A 
JenaImageLibrary4j80 
Target Sequence
UniProtKBT6NU53RecName: Full=Chaperone protein DnaJ;
InterProT6NU53 
PFAMT6NU53 
ProdomT6NU53 
UniProtKBI2Y3Y5RecName: Full=Chaperone protein DnaJ;
InterProI2Y3Y5 
PFAMI2Y3Y5 
ProdomI2Y3Y5 
UniProtKBI0ZMV5RecName: Full=Chaperone protein DnaJ;
InterProI0ZMV5 
PFAMI0ZMV5 
ProdomI0ZMV5 
UniProtKBA0A079D512RecName: Full=Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159};
InterProA0A079D512 
PFAMA0A079D512 
ProdomA0A079D512 
UniProtKBH9UN11RecName: Full=Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159};
InterProH9UN11 
PFAMH9UN11 
ProdomH9UN11 
UniProtKBA0A024L7K0RecName: Full=Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152};
InterProA0A024L7K0 
PFAMA0A024L7K0 
ProdomA0A024L7K0 
UniProtKBH0Q725RecName: Full=Chaperone protein DnaJ;
InterProH0Q725 
PFAMH0Q725 
ProdomH0Q725 
UniProtKBB1XBE0RecName: Full=Chaperone protein DnaJ;
InterProB1XBE0 
PFAMB1XBE0 
ProdomB1XBE0 
UniProtKBG2FA15RecName: Full=Chaperone protein DnaJ;
InterProG2FA15 
PFAMG2FA15 
ProdomG2FA15 
UniProtKBG2APE4RecName: Full=Chaperone protein DnaJ;
InterProG2APE4 
PFAMG2APE4 
ProdomG2APE4 
UniProtKBC9QSQ4RecName: Full=Chaperone protein DnaJ;
InterProC9QSQ4 
PFAMC9QSQ4 
ProdomC9QSQ4 
UniProtKBF9R3M6RecName: Full=Chaperone protein DnaJ;
InterProF9R3M6 
PFAMF9R3M6 
ProdomF9R3M6 
UniProtKBL3LRJ0RecName: Full=Chaperone protein DnaJ;
InterProL3LRJ0 
PFAML3LRJ0 
ProdomL3LRJ0 
UniProtKBE2WQF4RecName: Full=Chaperone protein DnaJ;
InterProE2WQF4 
PFAME2WQF4 
ProdomE2WQF4 
UniProtKBT9VN63RecName: Full=Chaperone protein DnaJ;
InterProT9VN63 
PFAMT9VN63 
ProdomT9VN63 
UniProtKBT9BA71RecName: Full=Chaperone protein DnaJ;
InterProT9BA71 
PFAMT9BA71 
ProdomT9BA71 
UniProtKBT8D3W5RecName: Full=Chaperone protein DnaJ;
InterProT8D3W5 
PFAMT8D3W5 
ProdomT8D3W5 
UniProtKBT7ZLF8RecName: Full=Chaperone protein DnaJ;
InterProT7ZLF8 
PFAMT7ZLF8 
ProdomT7ZLF8 
UniProtKBS1PMB3RecName: Full=Chaperone protein DnaJ;
InterProS1PMB3 
PFAMS1PMB3 
ProdomS1PMB3 
UniProtKBS0YM28RecName: Full=Chaperone protein DnaJ;
InterProS0YM28 
PFAMS0YM28 
ProdomS0YM28 
UniProtKBA0A0G3HKV6RecName: Full=Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152};
InterProA0A0G3HKV6 
PFAMA0A0G3HKV6 
ProdomA0A0G3HKV6 
UniProtKBP08622RecName: Full=Chaperone protein DnaJ;AltName: Full=HSP40;AltName: Full=Heat shock protein J;
InterProP08622 
PFAMP08622 
ProdomP08622 
UniProtKBB1XBE0SubName: Full=Chaperone Hsp40, co-chaperone with DnaK;
InterProB1XBE0 
PFAMB1XBE0 
ProdomB1XBE0 
UniProtKBC9QSQ4RecName: Full=Chaperone protein DnaJ;
InterProC9QSQ4 
PFAMC9QSQ4 
ProdomC9QSQ4 
UniProtKBA0A0M7NI79Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}
InterProA0A0M7NI79 
PFAMA0A0M7NI79 
ProdomA0A0M7NI79 
UniProtKBA0A8F9MHV9SubName: Full=Molecular chaperone DnaJ {ECO:0000313|EMBL:QYE25107.1}EC=1.8.4.- {ECO:0000313|EMBL:QYE25107.1}
InterProA0A8F9MHV9 
PFAMA0A8F9MHV9 
ProdomA0A8F9MHV9 
UniProtKBA0A181WY69Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}
InterProA0A181WY69 
PFAMA0A181WY69 
ProdomA0A181WY69 
UniProtKBA0A8F8DEI1SubName: Full=Molecular chaperone DnaJ {ECO:0000313|EMBL:QXZ36332.1}EC=1.8.4.- {ECO:0000313|EMBL:QXZ36332.1}
InterProA0A8F8DEI1 
PFAMA0A8F8DEI1 
ProdomA0A8F8DEI1 
UniProtKBE2WQF4RecName: Full=Chaperone protein DnaJ;
InterProE2WQF4 
PFAME2WQF4 
ProdomE2WQF4 
UniProtKBF9R3M6RecName: Full=Chaperone protein DnaJ;
InterProF9R3M6 
PFAMF9R3M6 
ProdomF9R3M6 
UniProtKBI2Y3Y5SubName: Full=Chaperone protein DnaJ;
InterProI2Y3Y5 
PFAMI2Y3Y5 
ProdomI2Y3Y5 
UniProtKBA0A5Q3TI37Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}
InterProA0A5Q3TI37 
PFAMA0A5Q3TI37 
ProdomA0A5Q3TI37 
UniProtKBI0ZMV5SubName: Full=Chaperone protein DnaJ;
InterProI0ZMV5 
PFAMI0ZMV5 
ProdomI0ZMV5 
UniProtKBH9UN11SubName: Full=Chaperone protein dnaJ;
InterProH9UN11 
PFAMH9UN11 
ProdomH9UN11 
UniProtKBH0Q725RecName: Full=Chaperone protein DnaJ;
InterProH0Q725 
PFAMH0Q725 
ProdomH0Q725 
UniProtKBG2FA15RecName: Full=Chaperone protein DnaJ;
InterProG2FA15 
PFAMG2FA15 
ProdomG2FA15 
UniProtKBG2APE4RecName: Full=Chaperone protein DnaJ;
InterProG2APE4 
PFAMG2APE4 
ProdomG2APE4 
UniProtKBB1XBE0RecName: Full=Chaperone protein DnaJ {ECO:0000255|HAMAP-Rule:MF_01152};
InterProB1XBE0 
PFAMB1XBE0 
ProdomB1XBE0 
UniProtKBP08622.3DNAJ_ECOLI RecName: Full=Chaperone protein dnaJ; AltName: Full=HSP40; AltName: Full=Heat shock protein J
InterProP08622.3 
PFAMP08622.3 
ProdomP08622.3 
UniProtKBP08622RecName: Full=Chaperone protein DnaJ;AltName: Full=HSP40;AltName: Full=Heat shock protein J;
InterProP08622 
PFAMP08622 
ProdomP08622 
UniProtKBB1XBE0.1DNAJ_ECODH RecName: Full=Chaperone protein dnaJ
InterProB1XBE0.1 
PFAMB1XBE0.1 
ProdomB1XBE0.1 
RefSeqNP_414556.1 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001728998.1 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_000679.1 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. W3110]
GenPept260450773chaperone protein DnaJ
GenPept817581679chaperone Hsp40, DnaK co-chaperone
GenPept118719DNAJ_ECOLI RecName: Full=Chaperone protein DnaJ; AltName: Full=HSP40; AltName: Full=Heat shock protein J
GenPept359330888chaperone Hsp40, co-chaperone with DnaK
GenPept383101395Chaperone protein dnaJ
GenPept664682467molecular chaperone DnaJ
GenPept665441390Chaperone protein DnaJ
GenPept682117626chaperone Hsp40, DnaK co-chaperone
GenPept687670957chaperone with DnaK; heat shock protein, subunit of DnaJ/DnaK/GrpE
GenPept687675243chaperone with DnaK; heat shock protein, subunit of DnaJ/DnaK/GrpE
GenPept72228HHECDJ heat shock protein dnaJ - Escherichia coli
GenPept730582470chaperone Hsp40, co-chaperone with DnaK
GenPept731470199chaperone Hsp40, co-chaperone with DnaK
GenPept315134711chaperone Hsp40, co-chaperone with DnaK
GenPept281047427Sequence 32 from patent US 7608683
GenPept145769heat shock protein dnaJ
GenPept145772DnaJ
GenPept16128009 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. MG1655]
GenPept167273887Sequence 689 from patent US 7314974
GenPept169887513chaperone Hsp40, co-chaperone with DnaK
GenPept170079678 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. DH10B]
GenPept1786197chaperone Hsp40, DnaK co-chaperone
GenPept21321903chaperone Hsp40, co-chaperone with DnaK
GenPept216441DnaJ
GenPept226735566DNAJ_ECODH RecName: Full=Chaperone protein dnaJ
GenPept732686009molecular chaperone DnaJ
GenPept802133641chaperone Hsp40, co-chaperone with DnaK
GenPept808698814molecular chaperone DnaJ
GenPept932857960Chaperone protein DnaJ
GenPept817589961chaperone Hsp40, DnaK co-chaperone
GenPept827617986chaperone Hsp40, co-chaperone with DnaK protein
GenPept827620694chaperone Hsp40, co-chaperone with DnaK protein
GenPept89106899 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. W3110]
GenPept899721080molecular chaperone DnaJ
GenPept899725433molecular chaperone DnaJ
GenPept899729785molecular chaperone DnaJ
GenPept817585820chaperone Hsp40, DnaK co-chaperone
GenPept817577540chaperone Hsp40, DnaK co-chaperone
GenPept808703187molecular chaperone DnaJ
GenPept808707566molecular chaperone DnaJ
GenPept808711926molecular chaperone DnaJ
GenPept808716338molecular chaperone DnaJ
GenPept808720709molecular chaperone DnaJ
GenPept808729030molecular chaperone DnaJ
GenPept808733443molecular chaperone DnaJ
GenPept817573398chaperone Hsp40, DnaK co-chaperone
GenBankAAA00009.1 DnaJ [Escherichia coli]
GenBankAAA23693.1 heat shock protein dnaJ [Escherichia coli]
GenBankAAC73126.1 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. MG1655]
GenBankACX41195.1 chaperone protein DnaJ [Escherichia coli DH1]
GenBankACB01220.1 chaperone Hsp40, co-chaperone with DnaK [Escherichia coli str. K-12 substr. DH10B]