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ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link G1QZM3
Original Database ID sp P08100
Organism Gorilla gorilla gorilla, Pan paniscus, etc.
Annotation subname: full=uncharacterized
protein;
Sequence Length 348
 

SNP Information

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SNP ViewGenome
Browser		ResidueAA-Residue
Variants		InterfaceLigandStabilityValidated
rs28933395 P53 PR   *
rs28933394 T58 TR  
rs28933994 G106 GR  
rs28933992 D190 DNY  
rs28933995 M207 MR   *
rs28933993 H211 HP   *

Sequence Model Coverage summary
for all models of this sequence

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1u19crystal structure of bovine rhodopsin at 2.2 angstroms resolution
DBALI1u19A 
CATH1.20.1070.10 Domain: 1u19A00 Rhopdopsin 7-helix transmembrane proteins (100%)
JenaImageLibrary1u19 
Target Sequence
UniProtKBH2P9D0RecName: Full=Rhodopsin {ECO:0000256|RuleBase:RU004951};
InterProH2P9D0 
PFAMH2P9D0 
ProdomH2P9D0 
UniProtKBH2QNC5RecName: Full=Rhodopsin {ECO:0000256|RuleBase:RU004951};
InterProH2QNC5 
PFAMH2QNC5 
ProdomH2QNC5 
UniProtKBQ2M249RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProQ2M249 
PFAMQ2M249 
ProdomQ2M249 
UniProtKBG3R589RecName: Full=Rhodopsin {ECO:0000256|RuleBase:RU004951};
InterProG3R589 
PFAMG3R589 
ProdomG3R589 
UniProtKBQ16414RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProQ16414 
PFAMQ16414 
ProdomQ16414 
UniProtKBP08100RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProP08100 
PFAMP08100 
ProdomP08100 
UniProtKBG1QZM3RecName: Full=Rhodopsin {ECO:0000256|RuleBase:RU004951};
InterProG1QZM3 
PFAMG1QZM3 
ProdomG1QZM3 
UniProtKBH2P9D0SubName: Full=Uncharacterized protein;
InterProH2P9D0 
PFAMH2P9D0 
ProdomH2P9D0 
UniProtKBG3R589SubName: Full=Uncharacterized protein;
InterProG3R589 
PFAMG3R589 
ProdomG3R589 
UniProtKBG1QZM3SubName: Full=Uncharacterized protein;
InterProG1QZM3 
PFAMG1QZM3 
ProdomG1QZM3 
UniProtKBA0A6D2Y6I6Rhodopsin {ECO:0000256|ARBA:ARBA00013487, ECO:0000256|RuleBase:RU004951}
InterProA0A6D2Y6I6 
PFAMA0A6D2Y6I6 
ProdomA0A6D2Y6I6 
UniProtKBA0A663D5J8Rhodopsin {ECO:0000256|ARBA:ARBA00013487, ECO:0000256|RuleBase:RU004951}
InterProA0A663D5J8 
PFAMA0A663D5J8 
ProdomA0A663D5J8 
UniProtKBA0A2J8KA91Rhodopsin {ECO:0000256|ARBA:ARBA00013487, ECO:0000256|RuleBase:RU004951}
InterProA0A2J8KA91 
PFAMA0A2J8KA91 
ProdomA0A2J8KA91 
UniProtKBA0A2J8TVK6Rhodopsin {ECO:0000256|ARBA:ARBA00013487, ECO:0000256|RuleBase:RU004951}
InterProA0A2J8TVK6 
PFAMA0A2J8TVK6 
ProdomA0A2J8TVK6 
UniProtKBA0A2R9C4X0Rhodopsin {ECO:0000256|ARBA:ARBA00013487, ECO:0000256|RuleBase:RU004951}
InterProA0A2R9C4X0 
PFAMA0A2R9C4X0 
ProdomA0A2R9C4X0 
UniProtKBH2QNC5SubName: Full=Uncharacterized protein;
InterProH2QNC5 
PFAMH2QNC5 
ProdomH2QNC5 
UniProtKBQ2M249Rhodopsin
InterProQ2M249 
PFAMQ2M249 
ProdomQ2M249 
UniProtKBP08100RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProP08100 
PFAMP08100 
ProdomP08100 
UniProtKBP08100.1OPSD_HUMAN RecName: Full=Rhodopsin; AltName: Full=Opsin-2
InterProP08100.1 
PFAMP08100.1 
ProdomP08100.1 
UniProtKBQ16414RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProQ16414 
PFAMQ16414 
ProdomQ16414 
UniProtKBQ2M249RecName: Full=Rhodopsin;AltName: Full=Opsin-2;
InterProQ2M249 
PFAMQ2M249 
ProdomQ2M249 
RefSeqXP_032005723.1rhodopsin
RefSeqXP_002813191.1 PREDICTED: rhodopsin-like [Pongo abelii]
RefSeqXP_516740.2 PREDICTED: rhodopsin [Pan troglodytes]
RefSeqNP_000530.1 rhodopsin [Homo sapiens]
GenPept129207OPSD_HUMAN RecName: Full=Rhodopsin; AltName: Full=Opsin-2
GenPept915796157Sequence 1253 from patent US 8999380
GenPept31873264hypothetical protein
GenPept302908550Sequence 92 from patent US 7696316
GenPept297670049 PREDICTED: rhodopsin-like [Pongo abelii]
GenPept28798805unnamed protein product
GenPept21928611seven transmembrane helix receptor
GenPept208967306rhodopsin, partial
GenPept1236137rhodopsin
GenPept119599650rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant)
GenPept117644328hypothetical protein, partial
GenPept114589117 PREDICTED: rhodopsin [Pan troglodytes]
GenPept11450207 rhodopsin [Homo sapiens]
GenPept108752084RHO protein, partial
GenPept4506527 rhodopsin [Homo sapiens]
GenPept476517OOHU rhodopsin - human
GenPept568535238Sequence 23859 from patent US 8586006
GenPept915740686Sequence 740 from patent US 8999654
GenPept85567192Rhodopsin
GenPept10059598Sequence 8 from patent US 5985583
GenPept756535928Sequence 17 from patent US 8748182
GenPept756726314Sequence 166 from patent US 8809001
GenPept85567017Rhodopsin
GenBankAAC31763.1 rhodopsin [Homo sapiens]
GenBankAAI11452.1 RHO protein [synthetic construct]
GenBankAAI12105.1 Rhodopsin [Homo sapiens]
GenBankAAI12107.1 Rhodopsin [Homo sapiens]
GenBankEAW79244.1 rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) [Homo sapiens]
ENSEMBLENSP00000296271Rhodopsin (Opsin 2). [Homo sapiens]
EMBLCAD97623.1 
EMBLCAL37658.1 
UCSCGenomeBrowserP08100 
UCSCGenomeBrowserENSPTRT00000028711.1 
ENSEMBLENSP00000296271 
ENSEMBLENSPTRP00000026495 
ENSEMBLENSP00000296271TDI sequence
ENSEMBLGENSCAN00000029956 
ENSEMBLENSP00000296271