University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q8WZ42.2
Original Database ID sp Q8WZ42
Organism Homo sapiens
Annotation titin_human recname: full=titin;
altname: full=connectin; altname:
full=rhabdomy osarcoma antigen
mu-rms-40.14
Sequence Length 34350

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region17742-18031
Protein Length34350
Template PDB Code1p9mA
Template Region2-295
Sequence Identity14%
E-Value0
GA3410.36
MPQS-0.131257
z-DOPE0.72
TSVMod MethodMSALL
TSVMod RMSD9.804
TSVMod NO350.364
DatasetMW-TB_rIL6
ModPipe VersionSVN.r1340:1348M
Model Date2011-02-04

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1p9mcrystal structure of the hexameric human il-6/il-6 alpha receptor/gp130 complex
DBALI1p9mA 
CATH2.60.40.10 Domain: 1p9mA01 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1p9mA02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1p9mA03 Immunoglobulins (96%)
JenaImageLibrary1p9m 
Target Sequence
UniProtKBQ8WZ42.2TITIN_HUMAN RecName: Full=Titin; AltName: Full=Connectin; AltName: Full=Rhabdomyosarcoma antigen MU-RMS-40.14
InterProQ8WZ42.2 
PFAMQ8WZ42.2 
ProdomQ8WZ42.2 
UniProtKBQ9Y6L9RecName: Full=Titin;EC=2.7.11.1;AltName: Full=Connectin;AltName: Full=Rhabdomyosarcoma antigen MU-RMS-40.14;
InterProQ9Y6L9 
PFAMQ9Y6L9 
ProdomQ9Y6L9 
GenPept108861911TITIN_HUMAN RecName: Full=Titin; AltName: Full=Connectin; AltName: Full=Rhabdomyosarcoma antigen MU-RMS-40.14