University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 291045230
Original Database ID gi 291045230
Organism Homo sapiens
Annotation titin isoform novex-2 [homo sapiens]
Sequence Length 27118

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region3032-3578
Protein Length27118
Template PDB Code3b43A
Template Region22-564
Sequence Identity27%
E-Value0
GA3411
MPQS0.0837711
z-DOPE1.56
TSVMod MethodMTALL
TSVMod RMSD56.103
TSVMod NO350.054
DatasetH_sapiens_2013_D1
ModPipe VersionSVN.r1513
Model Date2013-10-23

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3b43i-band fragment i65-i70 from titin
DBALI3b43A 
CATH2.60.40.10 Domain: 3b43A01 Immunoglobulins (74%)
CATH2.60.40.10 Domain: 3b43A02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 3b43A03 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 3b43A04 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 3b43A05 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 3b43A06 Immunoglobulins (98%)
JenaImageLibrary3b43 
Target Sequence
UniProtKBE7ET18SubName: Full=Uncharacterized protein;
InterProE7ET18 
PFAME7ET18 
ProdomE7ET18 
RefSeqNP_597681.3 titin isoform novex-2 [Homo sapiens]
GenPept291045230 titin isoform novex-2 [Homo sapiens]
ENSEMBLENSP00000340554