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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P23852
Original Database ID TR RAPA_ECO57
Organism Escherichia coli, Escherichia coli O157:H7
Annotation rna polymerase associated protein
(atp-dependent helicase hepa)
Sequence Length 967

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region171-727
Protein Length967
Template PDB Code1m6nA
Template Region95-657
Sequence Identity9%
E-Value3e-12
GA3410.21
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1m6ncrystal structure of the seca translocation atpase from bacillus subtilis ; PFAM: PF00271 PF01043 ; SCOP: 78697 78698 78699 78700
DBALI1m6nA 
CATH3.40.50.300 Domain: 1m6nA01 P-loop containing nucleotide triphosphate hydrolases (49%)
CATH3.90.1440.10 Domain: 1m6nA02 Pre-protein croslinking domain of SecA (100%)
JenaImageLibrary1m6n 
Target Sequence
UniProtKBP23852RNA polymerase associated protein (ATP-dependent helicase hepA)
InterProP23852 
PFAMP23852 
ProdomP23852 
UniProtKBP60240RNA polymerase-associated protein rapA (EC 3.6.1.-) (ATP-dependentDE helicase hepA)
InterProP60240 
PFAMP60240 
ProdomP60240 
UniProtKBP60241RNA polymerase-associated protein rapA (EC 3.6.1.-) (ATP-dependentDE helicase hepA)
InterProP60241 
PFAMP60241 
ProdomP60241