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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P08575.2
Original Database ID GN PTPRC
Organism Homo sapiens
Annotation ptprc_human recname: full=receptor-type
tyrosine-protein phosphatase c;
altname: full=leukocyte common
antigen; short=l-ca; altname:
full=t200; altna ...
Sequence Length 1304

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region622-1228
Protein Length1304
Template PDB Code1ygrA
Template Region599-1205
Sequence Identity99%
E-Value0
GA3411
MPQS1.60209
z-DOPE-1.05
TSVMod MethodMSALL
TSVMod RMSD2.45
TSVMod NO350.927
DatasetH_sapiens_2013_D1
ModPipe VersionSVN.r1513
Model Date2013-10-23

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1ygrcrystal structure of the tandem phosphatase domain of rptp cd45
DBALI1ygrA 
CATH3.90.190.10 Domain: 1ygrA01 Protein tyrosine phosphatase superfamily (100%)
JenaImageLibrary1ygr 
Target Sequence
UniProtKBQ9H0Y6RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProQ9H0Y6 
PFAMQ9H0Y6 
ProdomQ9H0Y6 
UniProtKBA8K7W6RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProA8K7W6 
PFAMA8K7W6 
ProdomA8K7W6 
UniProtKBP08575RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProP08575 
PFAMP08575 
ProdomP08575 
UniProtKBQ16614RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProQ16614 
PFAMQ16614 
ProdomQ16614 
UniProtKBQ16614RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProQ16614 
PFAMQ16614 
ProdomQ16614 
UniProtKBP08575.2PTPRC_HUMAN RecName: Full=Receptor-type tyrosine-protein phosphatase C; AltName: Full=Leukocyte common antigen; Short=L-CA; AltName: Full=T200; AltName: CD_antigen=CD45; Flags: Precursor
InterProP08575.2 
PFAMP08575.2 
ProdomP08575.2 
UniProtKBP08575RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProP08575 
PFAMP08575 
ProdomP08575 
UniProtKBQ9H0Y6RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProQ9H0Y6 
PFAMQ9H0Y6 
ProdomQ9H0Y6 
UniProtKBA8K7W6RecName: Full=Receptor-type tyrosine-protein phosphatase C;EC=3.1.3.48;AltName: Full=Leukocyte common antigen;Short=L-CA;AltName: Full=T200;AltName: CD_antigen=CD45;Flags: Precursor;
InterProA8K7W6 
PFAMA8K7W6 
ProdomA8K7W6 
RefSeqNP_002829.2 receptor-type tyrosine-protein phosphatase C isoform 1 precursor [Homo sapiens]
GenPept915840031Sequence 139 from patent US 9012145
GenPept568533853Sequence 19618 from patent US 8586006
GenPept353304874Sequence 139 from patent US 8039210
GenPept228160711Sequence 1043 from patent US 7482117
GenPept239641669Sequence 486 from patent US 7521195
GenPept281037766Sequence 1923 from patent US 7608413
GenPept314342670Sequence 1043 from patent US 7781168
GenPept314536215Sequence 146 from patent US 7807392
GenPept314581098Sequence 28 from patent US 7816082
GenPept33112650PTPRC_HUMAN RecName: Full=Receptor-type tyrosine-protein phosphatase C; AltName: Full=Leukocyte common antigen; Short=L-CA; AltName: Full=T200; AltName: CD_antigen=CD45; Flags: Precursor
GenPept331588961Sequence 42 from patent US 7910315
GenPept344969117Sequence 1923 from patent US 7998689
GenPept18641347 receptor-type tyrosine-protein phosphatase C isoform 1 precursor [Homo sapiens]
ENSEMBLENSP00000271610Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA) (CD45 antigen) (T200). [Homo sapiens]
ENSEMBLENSP00000271610 
ENSEMBLENSP00000271610TDI sequence
ENSEMBLENSP00000458322