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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 52695707
Original Database ID UP Q9GZU7
Organism
Annotation a chain a, three-dimensional structure
of a rna-polymerase ii binding
protein
Sequence Length 197

Dataset Information:

The newest dataset for this sequence was created on 2013-03-06. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-181
Protein Length197
Template PDB Code2ghtA
Template Region77-256
Sequence Identity97%
E-Value0
GA3411
MPQS2.09591
z-DOPE-1.33
TSVMod MethodMTALL
TSVMod RMSD0.651
TSVMod NO350.994
DatasetMW-EFI_update_D9_D1
ModPipe VersionSVN.r1409M
Model Date2013-03-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
PharmGKB   PharmGKB data available for CTDSP1
Template Structure
PDB2ghtctd-specific phosphatase scp1 in complex with peptide from c-terminal domain of rna polymerase ii
DBALI2ghtA 
CATH3.40.50.1000 Domain: 2ghtA00 Rossmann fold (100%)
JenaImageLibrary2ght 
Target Sequence
SFLD52695707Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
PDB1T9ZA Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein
PDB1T9ZAChain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein
GenPept52695707A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein