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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A024R461
Original Database ID EN ENSP00000273062.2
Organism Cercocebus atys, Cercocebus torquatus atys, etc.
Annotation subname: full=ctd (carboxy-terminal
domain, rna polymerase ii, polypeptide
a) sm all phosphatase 1, isoform
cra_a {eco:0000313|embl:eaw70615.1};
Sequence Length 261

Dataset Information:

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Model Information

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Target Region77-256
Protein Length261
Template PDB Code2ghtA
Template Region77-256
Sequence Identity99%
E-Value0
GA3411
MPQS1.92266
z-DOPE-1.5
TSVMod MethodMTALL
TSVMod RMSD0.617
TSVMod NO350.994
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
PharmGKB   PharmGKB data available for CTDSP1
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2ghtctd-specific phosphatase scp1 in complex with peptide from c-terminal domain of rna polymerase ii
DBALI2ghtA 
CATH3.40.50.1000 Domain: 2ghtA00 Rossmann fold (100%)
JenaImageLibrary2ght 
Target Sequence
SFLD10864009Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBC9IYG0RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProC9IYG0 
PFAMC9IYG0 
ProdomC9IYG0 
UniProtKBA0A096NA09SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPANP00000009503};
InterProA0A096NA09 
PFAMA0A096NA09 
ProdomA0A096NA09 
UniProtKBQ7Z5Q3RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ7Z5Q3 
PFAMQ7Z5Q3 
ProdomQ7Z5Q3 
UniProtKBQ7Z5Q4RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ7Z5Q4 
PFAMQ7Z5Q4 
ProdomQ7Z5Q4 
UniProtKBQ9GZU7RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ9GZU7 
PFAMQ9GZU7 
ProdomQ9GZU7 
UniProtKBG3SER4SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000026598};
InterProG3SER4 
PFAMG3SER4 
ProdomG3SER4 
UniProtKBA0A024R461SubName: Full=CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, isoform CRA_a {ECO:0000313|EMBL:EAW70615.1};
InterProA0A024R461 
PFAMA0A024R461 
ProdomA0A024R461 
UniProtKBA0A6D2XAX2Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081}
InterProA0A6D2XAX2 
PFAMA0A6D2XAX2 
ProdomA0A6D2XAX2 
UniProtKBA0A2R9CGR7Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081}
InterProA0A2R9CGR7 
PFAMA0A2R9CGR7 
ProdomA0A2R9CGR7 
UniProtKBA0A8I5TJ97Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081}
InterProA0A8I5TJ97 
PFAMA0A8I5TJ97 
ProdomA0A8I5TJ97 
UniProtKBA0A2K5MC11Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081}
InterProA0A2K5MC11 
PFAMA0A2K5MC11 
ProdomA0A2K5MC11 
UniProtKBA0A2J8NGL6Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081}
InterProA0A2J8NGL6 
PFAMA0A2J8NGL6 
ProdomA0A2J8NGL6 
UniProtKBG3SER4SubName: Full=Uncharacterized protein;
InterProG3SER4 
PFAMG3SER4 
ProdomG3SER4 
UniProtKBC9IYG0RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProC9IYG0 
PFAMC9IYG0 
ProdomC9IYG0 
UniProtKBQ7Z5Q3RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ7Z5Q3 
PFAMQ7Z5Q3 
ProdomQ7Z5Q3 
UniProtKBQ7Z5Q4RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ7Z5Q4 
PFAMQ7Z5Q4 
ProdomQ7Z5Q4 
UniProtKBQ9GZU7RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1;EC=3.1.3.16;AltName: Full=Nuclear LIM interactor-interacting factor 3;Short=NLI-IF;Short=NLI-interacting facto
InterProQ9GZU7 
PFAMQ9GZU7 
ProdomQ9GZU7 
UniProtKBQ9GZU7.1CTDS1_HUMAN RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; AltName: Full=Nuclear LIM interactor-interacting factor 3; Short=NLI-IF; Short=NLI-interacting fa
InterProQ9GZU7.1 
PFAMQ9GZU7.1 
ProdomQ9GZU7.1 
RefSeqXP_030658350.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
RefSeqXP_025259710.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X5
RefSeqXP_024099411.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
RefSeqNP_067021.1 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 1 [Homo sapiens]
RefSeqXP_023076809.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
RefSeqXP_007964450.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
RefSeqXP_033086163.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X3
GenPept10257407AF229162_1 nuclear LIM interactor-interacting factor
GenPept10257410nuclear LIM interactor-interacting factor
GenPept10864009 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 1 [Homo sapiens]
GenPept119591021CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, isoform CRA_a
GenPept119591024CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, isoform CRA_a
GenPept15278033CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
GenPept155713474Sequence 54 from patent US 7244573
GenPept167773945CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, partial
GenPept17865510CTDS1_HUMAN RecName: Full=Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; AltName: Full=Nuclear LIM interactor-interacting factor 3; Short=NLI-IF; Short=NLI-interacting fa
GenPept208966090CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, partial
GenPept294567689Sequence 54 from patent US 7670785
GenPept14733512 nuclear LIM interactor-interacting factor [Homo sapiens]
GenPept649110802CTDSP1, partial
GenBankAAG15402.1AF229162_1 nuclear LIM interactor-interacting factor [Homo sapiens]
GenBankAAG15404.1 nuclear LIM interactor-interacting factor [Homo sapiens]
GenBankAAH12977.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Homo sapiens]
GenBankEAW70618.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, isoform CRA_a [Homo sapiens]
GenBankEAW70615.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, isoform CRA_a [Homo sapiens]
GenBankABZ92407.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [synthetic construct]
ENSEMBLENSP00000273062Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF). [Homo sapiens]
UCSCGenomeBrowserQ9GZU7 
ENSEMBLENSP00000273062 
ENSEMBLENSP00000273062TDI sequence
ENSEMBLENSP00000273062