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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77460.2
Original Database ID UP P77460
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ybcy_ecoli recname: full=putative
uncharacterized protein ybcy
Sequence Length 194

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-192
Protein Length194
Template PDB Code3ojfA
Template Region12-200
Sequence Identity28%
E-Value0.0052
GA3410.76
MPQS1.09159
z-DOPE0.83
TSVMod MethodMSALL
TSVMod RMSD9.413
TSVMod NO350.429
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3ojfcrystal structure of the bacillus cereus enoyl-acyl carrier protein reductase with nadp+ and indole naphthyridinone (complex form)
DBALI3ojfA 
JenaImageLibrary3ojf 
Target Sequence
UniProtKBQ2MBL9RecName: Full=Putative uncharacterized protein YbcY;
InterProQ2MBL9 
PFAMQ2MBL9 
ProdomQ2MBL9 
UniProtKBP77460RecName: Full=Putative uncharacterized protein YbcY;
InterProP77460 
PFAMP77460 
ProdomP77460 
UniProtKBG2F973SubName: Full=Putative uncharacterized protein;
InterProG2F973 
PFAMG2F973 
ProdomG2F973 
UniProtKBF9R5E4SubName: Full=Putative uncharacterized protein;
InterProF9R5E4 
PFAMF9R5E4 
ProdomF9R5E4 
UniProtKBE7CGJ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADU03134.1};
InterProE7CGJ5 
PFAME7CGJ5 
ProdomE7CGJ5 
UniProtKBC9R1G1SubName: Full=DLP12 prophage predicted SAM-dependent methyltransferase;SubName: Full=Methyltransferase type 12;
InterProC9R1G1 
PFAMC9R1G1 
ProdomC9R1G1 
UniProtKBF9R5E4SubName: Full=Putative uncharacterized protein;
InterProF9R5E4 
PFAMF9R5E4 
ProdomF9R5E4 
UniProtKBE7CGJ5SubName: Full=Putative uncharacterized protein;
InterProE7CGJ5 
PFAME7CGJ5 
ProdomE7CGJ5 
UniProtKBC9R1G1SubName: Full=DLP12 prophage; predicted SAM-dependent methyltransferase;SubName: Full=Methyltransferase type 12;
InterProC9R1G1 
PFAMC9R1G1 
ProdomC9R1G1 
UniProtKBG2F973SubName: Full=Putative uncharacterized protein;
InterProG2F973 
PFAMG2F973 
ProdomG2F973 
UniProtKBQ2MBL9Predicted SAM-dependent methyltransferase
InterProQ2MBL9 
PFAMQ2MBL9 
ProdomQ2MBL9 
UniProtKBP77460.2YBCY_ECOLI RecName: Full=Putative uncharacterized protein ybcY
InterProP77460.2 
PFAMP77460.2 
ProdomP77460.2 
UniProtKBP77460RecName: Full=Putative uncharacterized protein YbcY;
InterProP77460 
PFAMP77460 
ProdomP77460 
UniProtKBQ2MBL9RecName: Full=Putative uncharacterized protein YbcY;
InterProQ2MBL9 
PFAMQ2MBL9 
ProdomQ2MBL9 
RefSeqAP_001207.1 predicted SAM-dependent methyltransferase [Escherichia coli str. K-12 substr. W3110]
GenPept260450272Methyltransferase type 12
GenPept315135227DLP12 prophage; predicted SAM-dependent methyltransferase
GenPept315273065hypothetical protein pBMB0558_00340 (plasmid)
GenPept687675751DLP12 prophage; predicted SAM-dependent methyltransferase
GenPept48994878DLP12 prophage; predicted SAM-dependent methyltransferase
GenPept687671490DLP12 prophage; predicted SAM-dependent methyltransferase
GenPept932858453hypothetical protein BN1843_9470
GenPept89107427 predicted SAM-dependent methyltransferase [Escherichia coli str. K-12 substr. W3110]
GenPept85674697predicted SAM-dependent methyltransferase
GenPept109940182YBCY_ECOLI RecName: Full=Putative uncharacterized protein YbcY
GenBankACX40694.1 Methyltransferase type 12 [Escherichia coli DH1]