University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P25516.3
Original Database ID ref NP_415792.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation acon1_ecoli recname: full=aconitate
hydratase 1; short=aconitase 1;
altname: ful l=citrate hydro-lyase
1
Sequence Length 891

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region10-891
Protein Length891
Template PDB Code2b3yA
Template Region9-889
Sequence Identity51%
E-Value0
GA3411
MPQS1.6828
z-DOPE-1.37
TSVMod MethodMTALL
TSVMod RMSD0.148
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2b3ystructure of a monoclinic crystal form of human cytosolic aconitase (irp1)
DBALI2b3yA 
JenaImageLibrary2b3y 
Target Sequence
UniProtKBP78148RecName: Full=Aconitate hydratase 1;Short=Aconitase 1;EC=4.2.1.3;AltName: Full=Citrate hydro-lyase 1;
InterProP78148 
PFAMP78148 
ProdomP78148 
UniProtKBF9QXM0SubName: Full=Aconitate hydratase;EC=4.2.1.3;
InterProF9QXM0 
PFAMF9QXM0 
ProdomF9QXM0 
UniProtKBP78060RecName: Full=Aconitate hydratase 1;Short=Aconitase 1;EC=4.2.1.3;AltName: Full=Citrate hydro-lyase 1;
InterProP78060 
PFAMP78060 
ProdomP78060 
UniProtKBH0QA43SubName: Full=Aconitate hydratase 1;
InterProH0QA43 
PFAMH0QA43 
ProdomH0QA43 
UniProtKBP25516RecName: Full=Aconitate hydratase 1;Short=Aconitase 1;EC=4.2.1.3;AltName: Full=Citrate hydro-lyase 1;
InterProP25516 
PFAMP25516 
ProdomP25516 
UniProtKBH0QA43SubName: Full=Aconitate hydratase 1;
InterProH0QA43 
PFAMH0QA43 
ProdomH0QA43 
UniProtKBA0A7D6CVE7SubName: Full=Aconitate hydratase AcnA {ECO:0000313|EMBL:QLK28691.1}EC=4.2.1.3 {ECO:0000313|EMBL:QLK28691.1}
InterProA0A7D6CVE7 
PFAMA0A7D6CVE7 
ProdomA0A7D6CVE7 
UniProtKBF9QXM0SubName: Full=Aconitate hydratase;EC=4.2.1.3;
InterProF9QXM0 
PFAMF9QXM0 
ProdomF9QXM0 
UniProtKBP25516.3ACON1_ECOLI RecName: Full=Aconitate hydratase 1; Short=Aconitase 1; AltName: Full=Citrate hydro-lyase 1
InterProP25516.3 
PFAMP25516.3 
ProdomP25516.3 
UniProtKBP78060RecName: Full=Aconitate hydratase A {ECO:0000303|PubMed:10585860};Short=ACN {ECO:0000303|PubMed:10585860};Short=Aconitase {ECO:0000303|PubMed:10585860};EC=4.2.1.3 {ECO:0000269|PubMed:10585860};AltName
InterProP78060 
PFAMP78060 
ProdomP78060 
UniProtKBP78148RecName: Full=Aconitate hydratase A {ECO:0000303|PubMed:10585860};Short=ACN {ECO:0000303|PubMed:10585860};Short=Aconitase {ECO:0000303|PubMed:10585860};EC=4.2.1.3 {ECO:0000269|PubMed:10585860};AltName
InterProP78148 
PFAMP78148 
ProdomP78148 
UniProtKBP25516RecName: Full=Aconitate hydratase A {ECO:0000303|PubMed:10585860};Short=ACN {ECO:0000303|PubMed:10585860};Short=Aconitase {ECO:0000303|PubMed:10585860};EC=4.2.1.3 {ECO:0000269|PubMed:10585860};AltName
InterProP25516 
PFAMP25516 
ProdomP25516 
RefSeqNP_415792.1 aconitate hydratase 1 [Escherichia coli str. K-12 substr. MG1655]
GenPept817591146aconitate hydratase 1, aconitase A
GenPept817587005aconitate hydratase 1, aconitase A
GenPept817582864aconitate hydratase 1, aconitase A
GenPept817578725aconitate hydratase 1, aconitase A
GenPept166215073ACON1_ECOLI RecName: Full=Aconitate hydratase 1; Short=Aconitase 1; AltName: Full=Citrate hydro-lyase 1
GenPept167274009Sequence 811 from patent US 7314974
GenPept1787531aconitate hydratase 1; aconitase A
GenPept18857401unnamed protein product
GenPept359331893aconitate hydratase 1
GenPept383249105Sequence 10 from patent US 8143036
GenPept389968665Sequence 8 from patent US 8192965
GenPept549812770aconitate hydratase 1
GenPept732684804aconitate hydratase
GenPept7437038G64875 aconitate hydratase (EC 4.2.1.3) - Escherichia coli
GenPept757003411Sequence 427 from patent US 8883464
GenPept802134800aconitate hydratase 1
GenPept817574583aconitate hydratase 1, aconitase A
GenPept16129237 aconitate hydratase 1 [Escherichia coli str. K-12 substr. MG1655]
GenBankAAC74358.1 aconitate hydratase 1 [Escherichia coli str. K-12 substr. MG1655]