University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P13000
Original Database ID 11
Organism Escherichia coli
Annotation dethiobiotin synthetase (ec 6.3.3.3)
(dethiobiotin synthase) (dtbde
synthetase ) (dtbs)
Sequence Length 224

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-224
Protein Length224
Template PDB Code1byi
Template Region1-224
Sequence Identity100%
E-Value1e-37
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1byistructure of apo-dethiobiotin synthase at 0.97 angstroms resolution
DBALI1byi 
JenaImageLibrary1byi 
Target Sequence
UniProtKBP13000Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin synthase) (DTBDE synthetase) (DTBS)
InterProP13000 
PFAMP13000 
ProdomP13000 
PDB1DBSAChain A, Mechanistic Implications And Family Relationships From The Structure Of Dethiobiotin Synthetase
PDB1DAFAChain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid, Adp, And Calcium
PDB1DAFA Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid, Adp, And Calcium
PDB1DAEAChain A, Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid
PDB1DAEA Chain A, Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid
PDB1DADAChain A, Dethiobiotin Synthetase Complexed With Adp
PDB1DADA Chain A, Dethiobiotin Synthetase Complexed With Adp
PDB1BYIAChain A, Structure Of Apo-dethiobiotin Synthase At 0.97 Angstroms Resolution
PDB1DAGA Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate
PDB1DAGAChain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8-Amino- Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate
PDB1DAHA Chain A, Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese
PDB1DAHAChain A, Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese
PDB1DAIA Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid
PDB1DAIAChain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8-Amino- Nonanoic Acid
PDB1DAKA Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex Reaction Intermediate Adp And Mixed Anhydride
PDB1DAMA Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesium
PDB1DAMAChain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesium
PDB1DBSA Chain A, Mechanistic Implications And Family Relationships From The Structure Of Dethiobiotin Synthetase
PDB1BYIA Chain A, Structure Of Apo-Dethiobiotin Synthase At 0.97 Angstroms Resolution
PDB1BS1AChain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesium
PDB1DAKAChain A, Dethiobiotin Synthetase From Escherichia Coli, Complex Reaction Intermediate Adp And Mixed Anhydride
PDB1A82A Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid
PDB1A82AChain A, Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid
PDB1BS1A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesium
GenPept157830789A Chain A, Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid
GenPept157830788A Chain A, Dethiobiotin Synthetase Complexed With Adp
GenPept157830501A Chain A, Structure Of Apo-dethiobiotin Synthase At 0.97 Angstroms Resolution
GenPept157829729A Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid
GenPept10653291DBS Chain , Dethiobiotin Synthetase (E.C.6.3.3.3)
GenPept157830790A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid, Adp, And Calcium
GenPept4699532A Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex Reaction Intermediate Adp And Mixed Anhydride
GenPept51074211A82 Chain , Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid
GenPept55421461BYI Chain , Structure Of Apo-Dethiobiotin Synthase At 0.97 Angstroms Resolution
GenPept4389237A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesium
GenPept157830791A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8-Amino- Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate
GenPept16334241DAD Chain , Dethiobiotin Synthetase Complexed With Adp
GenPept16334231DAE Chain , Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid
GenPept16334221DAF Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid, Adp, And Calcium
GenPept16334211DAG Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate
GenPept16334201DAH Chain , Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese
GenPept16334191DAI Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid
GenPept157830799A Chain A, Mechanistic Implications And Family Relationships From The Structure Of Dethiobiotin Synthetase
GenPept157830793A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8-Amino- Nonanoic Acid
GenPept157830792A Chain A, Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese
GenPept4389215A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesium