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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link G3SHV6
Original Database ID EN ENSP00000384273.3
Organism Gorilla gorilla gorilla, Homo sapiens
Annotation subname: full=uncharacterized
protein;
Sequence Length 551

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region20-362
Protein Length551
Template PDB Code2o61A
Template Region20-1081
Sequence Identity82%
E-Value0
GA3411
MPQS1.557
z-DOPE-0.42
TSVMod MethodMSALL
TSVMod RMSD1.825
TSVMod NO350.94
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
PharmGKB   PharmGKB data available for RELA
Template Structure
PDB2o61crystal structure of nfkb, irf7, irf3 bound to the interferon-b enhancer
DBALI2o61A 
JenaImageLibrary2o61 
Target Sequence
UniProtKBQ6SLK1RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ6SLK1 
PFAMQ6SLK1 
ProdomQ6SLK1 
UniProtKBG3SHV6SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000027696};
InterProG3SHV6 
PFAMG3SHV6 
ProdomG3SHV6 
UniProtKBQ6GTV1RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ6GTV1 
PFAMQ6GTV1 
ProdomQ6GTV1 
UniProtKBQ04206RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ04206 
PFAMQ04206 
ProdomQ04206 
UniProtKBG3SHV6SubName: Full=Uncharacterized protein;
InterProG3SHV6 
PFAMG3SHV6 
ProdomG3SHV6 
UniProtKBQ04206RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ04206 
PFAMQ04206 
ProdomQ04206 
UniProtKBQ04206.2TF65_HUMAN RecName: Full=Transcription factor p65; AltName: Full=Nuclear factor NF-kappa-B p65 subunit; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3
InterProQ04206.2 
PFAMQ04206.2 
ProdomQ04206.2 
UniProtKBQ6GTV1RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ6GTV1 
PFAMQ6GTV1 
ProdomQ6GTV1 
UniProtKBQ6SLK1RecName: Full=Transcription factor p65;AltName: Full=Nuclear factor NF-kappa-B p65 subunit;AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3;
InterProQ6SLK1 
PFAMQ6SLK1 
ProdomQ6SLK1 
RefSeqXP_034788924.1transcription factor p65 isoform X1
RefSeqNP_068810.3 transcription factor p65 isoform 1 [Homo sapiens]
GenPept757015907Sequence 27 from patent US 8889394
GenPept62906901TF65_HUMAN RecName: Full=Transcription factor p65; AltName: Full=Nuclear factor NF-kappa-B p65 subunit; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3
GenPept223468676 transcription factor p65 isoform 1 [Homo sapiens]
GenPept208968051v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65, partial
GenPept119594830v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian), isoform CRA_a
GenBankEAW74424.1 v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian), isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000311508Transcription factor p65 (Nuclear factor NF-kappa-B p65 subunit). [Homo sapiens]
UCSCGenomeBrowserQ04206 
ENSEMBLENSP00000311508 
ENSEMBLENSP00000311508TDI sequence
ENSEMBLENSP00000384273