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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1620664
Original Database ID gi 11386149
Organism Homo sapiens
Annotation phogrin
Sequence Length 1015

Dataset Information:

The newest dataset for this sequence was created on 2008-11-05. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region549-1013
Protein Length1015
Template PDB Code2b3oA
Template Region33-523
Sequence Identity25%
E-Value 0
GA3411
MPQS0.53
z-DOPE0.27
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO350.56426
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2b3ocrystal structure of human tyrosine phosphatase shp-1
DBALI2b3oA 
CATH3.30.505.10 Domain: 2b3oA01 SHC Adaptor Protein (70%)
CATH3.30.505.10 Domain: 2b3oA02 SHC Adaptor Protein (100%)
CATH3.90.190.10 Domain: 2b3oA03 Protein tyrosine phosphatase superfamily (99%)
JenaImageLibrary2b3o 
Target Sequence
UniProtKBQ92932Receptor-type tyrosine-protein phosphatase N2 precursor (EC 3.1.3.48)DE (R-PTP-N2) (Islet cell autoantigen-related protein) (ICAAR) (IAR)DE (Phogrin)
InterProQ92932 
PFAMQ92932 
ProdomQ92932 
RefSeqNP_002838.1 protein tyrosine phosphatase, receptor type, N polypeptide 2 isoform 1 precursor [Homo sapiens]
GenPept568530854Sequence 10414 from patent US 8586006
GenPept367519506Sequence 41 from patent US 8084200
GenPept2842713PTPX_HUMAN PROTEIN-TYROSINE PHOSPHATASE X PRECURSOR (R-PTP-X) (ISLET CELL AUTOANTIGEN RELATED PROTEIN) (ICAAR) (IAR) (PH
GenPept223088260Sequence 6276 from patent US 6812339
GenPept2135905JC5062 phogrin precursor - human
GenPept1620664phogrin
GenPept11386149 protein tyrosine phosphatase, receptor type, N polypeptide 2; A tyrosine phosphatase, phogrin/ICAAR (cf. Y08569/JC5062)
GenBankAAC50742.1 phogrin [Homo sapiens]
UCSCGenomeBrowserQ92932