University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 55661413
Original Database ID EN ENSP00000407979.1
Organism Pan troglodytes, Pongo abelii, etc.
Annotation phosphatidic acid phosphatase
type 2 domain containing 1a
Sequence Length 267

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region102-236
Protein Length267
Template PDB Code2w72B
Template Region30-144
Sequence Identity28%
E-Value0.71
GA3410.25
MPQS0.452618
z-DOPE0.81
TSVMod MethodMSALL
TSVMod RMSD14.723
TSVMod NO350.063
DatasetH_sapiens_2013_D1
ModPipe VersionSVN.r1513
Model Date2013-10-23

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2w72deoxygenated structure of a distal site hemoglobin mutant plus xe
DBALI2w72B 
CATH1.10.490.10 Domain: 2w72B00 Globins (79%)
JenaImageLibrary2w72 
Target Sequence
UniProtKBA0A0A0MSZ0SubName: Full=Phosphatidate phosphatase PPAPDC1A {ECO:0000313|Ensembl:ENSP00000407979};Flags: Fragment;
InterProA0A0A0MSZ0 
PFAMA0A0A0MSZ0 
ProdomA0A0A0MSZ0 
UniProtKBA0A2J8PC03SubName: Full=PLPP4 isoform 3 {ECO:0000313|EMBL:PNI81545.1}Flags: Fragment
InterProA0A2J8PC03 
PFAMA0A2J8PC03 
ProdomA0A2J8PC03 
UniProtKBA0A2J8W6L4SubName: Full=PLPP4 isoform 4 {ECO:0000313|EMBL:PNJ65425.1}Flags: Fragment
InterProA0A2J8W6L4 
PFAMA0A2J8W6L4 
ProdomA0A2J8W6L4 
UniProtKBQ5VZY2Phosphatidic acid phosphatase type 2 domain-containing protein 1ADE (Fragment)
InterProQ5VZY2 
PFAMQ5VZY2 
ProdomQ5VZY2 
GenPept55661413phosphatidic acid phosphatase type 2 domain containing 1A
EMBLCAH70332.1 
ENSEMBLENSP00000407979