University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A0E1M628
Original Database ID UP P0AA78
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=hexuronate transporter
{eco:0000313|embl:ajf57914.1};
Sequence Length 472

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region37-449
Protein Length472
Template PDB Code3nmoA
Template Region22-422
Sequence Identity18%
E-Value0
GA3410.97
MPQS0.7799
z-DOPE1.17
TSVMod MethodMSALL
TSVMod RMSD13.467
TSVMod NO350.307
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3nmocrystal structure of an engineered monomeric clc-ec1 cl-/h+ transporter
DBALI3nmoA 
JenaImageLibrary3nmo 
Target Sequence
UniProtKBB1XG97SubName: Full=Hexuronate transporter;
InterProB1XG97 
PFAMB1XG97 
ProdomB1XG97 
UniProtKBD8ATA0SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EFK13623.1};
InterProD8ATA0 
PFAMD8ATA0 
ProdomD8ATA0 
UniProtKBD6JEX5SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF11735.2};
InterProD6JEX5 
PFAMD6JEX5 
ProdomD6JEX5 
UniProtKBV0A214SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:ESA87900.1};
InterProV0A214 
PFAMV0A214 
ProdomV0A214 
UniProtKBU9YLA3SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:ESA75148.1};
InterProU9YLA3 
PFAMU9YLA3 
ProdomU9YLA3 
UniProtKBQ2M9B3RecName: Full=Hexuronate transporter;
InterProQ2M9B3 
PFAMQ2M9B3 
ProdomQ2M9B3 
UniProtKBP42609RecName: Full=Hexuronate transporter;
InterProP42609 
PFAMP42609 
ProdomP42609 
UniProtKBP0AA78RecName: Full=Hexuronate transporter;
InterProP0AA78 
PFAMP0AA78 
ProdomP0AA78 
UniProtKBH0QEC0SubName: Full=Hexuronate transporter;
InterProH0QEC0 
PFAMH0QEC0 
ProdomH0QEC0 
UniProtKBF9HYB8SubName: Full=ExuT3;
InterProF9HYB8 
PFAMF9HYB8 
ProdomF9HYB8 
UniProtKBF4V6J8SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EGI39472.1};
InterProF4V6J8 
PFAMF4V6J8 
ProdomF4V6J8 
UniProtKBF4SN94SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EGI09486.1};
InterProF4SN94 
PFAMF4SN94 
ProdomF4SN94 
UniProtKBE8J696SubName: Full=Hexuronate transporter ExuT;
InterProE8J696 
PFAME8J696 
ProdomE8J696 
UniProtKBE8IDE2SubName: Full=Hexuronate transporter ExuT;
InterProE8IDE2 
PFAME8IDE2 
ProdomE8IDE2 
UniProtKBD8B8F1SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EFJ64627.1};
InterProD8B8F1 
PFAMD8B8F1 
ProdomD8B8F1 
UniProtKBE3PK07SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:CBJ02863.1};
InterProE3PK07 
PFAME3PK07 
ProdomE3PK07 
UniProtKBC6UTY3SubName: Full=Hexuronate transporter;
InterProC6UTY3 
PFAMC6UTY3 
ProdomC6UTY3 
UniProtKBC4ZR09SubName: Full=Hexuronate transporter;
InterProC4ZR09 
PFAMC4ZR09 
ProdomC4ZR09 
UniProtKBC3STM7SubName: Full=Transport protein of hexuronates {ECO:0000313|EMBL:ACI77816.1};
InterProC3STM7 
PFAMC3STM7 
ProdomC3STM7 
UniProtKBB7NJV6SubName: Full=Hexuronate transporter;
InterProB7NJV6 
PFAMB7NJV6 
ProdomB7NJV6 
UniProtKBA0A0H3ML61SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:CAR19706.1};
InterProA0A0H3ML61 
PFAMA0A0H3ML61 
ProdomA0A0H3ML61 
UniProtKBA0A0F6FCF7SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:AJA28097.1};
InterProA0A0F6FCF7 
PFAMA0A0F6FCF7 
ProdomA0A0F6FCF7 
UniProtKBA0A0F6C966SubName: Full=Transport protein of hexuronates {ECO:0000313|EMBL:AFJ30772.1};
InterProA0A0F6C966 
PFAMA0A0F6C966 
ProdomA0A0F6C966 
UniProtKBA0A0E3MXJ4SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:AKA92279.1};
InterProA0A0E3MXJ4 
PFAMA0A0E3MXJ4 
ProdomA0A0E3MXJ4 
UniProtKBA0A0E1M628SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:AJF57914.1};
InterProA0A0E1M628 
PFAMA0A0E1M628 
ProdomA0A0E1M628 
UniProtKBB7LH28SubName: Full=ExuT protein {ECO:0000313|EMBL:CAU99666.1};
InterProB7LH28 
PFAMB7LH28 
ProdomB7LH28 
UniProtKBE8IRQ2SubName: Full=Hexuronate transporter ExuT;
InterProE8IRQ2 
PFAME8IRQ2 
ProdomE8IRQ2 
UniProtKBE8HZT4SubName: Full=Hexuronate transporter ExuT;
InterProE8HZT4 
PFAME8HZT4 
ProdomE8HZT4 
UniProtKBE8H6S7SubName: Full=Hexuronate transporter ExuT;
InterProE8H6S7 
PFAME8H6S7 
ProdomE8H6S7 
UniProtKBE6NX48SubName: Full=Hexuronate transporter;
InterProE6NX48 
PFAME6NX48 
ProdomE6NX48 
UniProtKBE8HKM7SubName: Full=Hexuronate transporter ExuT;
InterProE8HKM7 
PFAME8HKM7 
ProdomE8HKM7 
UniProtKBF4TJ61SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EGI20154.1};
InterProF4TJ61 
PFAMF4TJ61 
ProdomF4TJ61 
UniProtKBI2A0E8SubName: Full=Transport protein of hexuronates;
InterProI2A0E8 
PFAMI2A0E8 
ProdomI2A0E8 
UniProtKBP0AA79RecName: Full=Hexuronate transporter;
InterProP0AA79 
PFAMP0AA79 
ProdomP0AA79 
UniProtKBU9XYZ5SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:ESA65472.1};
InterProU9XYZ5 
PFAMU9XYZ5 
ProdomU9XYZ5 
UniProtKBC1NE73SubName: Full=Hexuronate transporter;
InterProC1NE73 
PFAMC1NE73 
ProdomC1NE73 
UniProtKBD6IE14SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EFF04870.2};
InterProD6IE14 
PFAMD6IE14 
ProdomD6IE14 
UniProtKBD3QS38SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:ADD58305.1};
InterProD3QS38 
PFAMD3QS38 
ProdomD3QS38 
UniProtKBI2QY51SubName: Full=Hexuronate transporter;
InterProI2QY51 
PFAMI2QY51 
ProdomI2QY51 
UniProtKBU5BMD9SubName: Full=Hexuronate transporter ExuT;
InterProU5BMD9 
PFAMU5BMD9 
ProdomU5BMD9 
UniProtKBE1HK72SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:EFK91648.1};
InterProE1HK72 
PFAME1HK72 
ProdomE1HK72 
UniProtKBE8H6S7SubName: Full=Hexuronate transporter ExuT;
InterProE8H6S7 
PFAME8H6S7 
ProdomE8H6S7 
UniProtKBH0QEC0SubName: Full=Hexuronate transporter;
InterProH0QEC0 
PFAMH0QEC0 
ProdomH0QEC0 
UniProtKBE8J696SubName: Full=Hexuronate transporter ExuT;
InterProE8J696 
PFAME8J696 
ProdomE8J696 
UniProtKBE8IDE2SubName: Full=Hexuronate transporter ExuT;
InterProE8IDE2 
PFAME8IDE2 
ProdomE8IDE2 
UniProtKBE8HZT4SubName: Full=Hexuronate transporter ExuT;
InterProE8HZT4 
PFAME8HZT4 
ProdomE8HZT4 
UniProtKBD8B8F1SubName: Full=D-galactonate transporter;
InterProD8B8F1 
PFAMD8B8F1 
ProdomD8B8F1 
UniProtKBE3PK07SubName: Full=Hexuronate transporter;
InterProE3PK07 
PFAME3PK07 
ProdomE3PK07 
UniProtKBE6NX48SubName: Full=Hexuronate transporter;
InterProE6NX48 
PFAME6NX48 
ProdomE6NX48 
UniProtKBD6IE14SubName: Full=Hexuronate transporter;
InterProD6IE14 
PFAMD6IE14 
ProdomD6IE14 
UniProtKBB1XG97SubName: Full=Hexuronate transporter;
InterProB1XG97 
PFAMB1XG97 
ProdomB1XG97 
UniProtKBD3QS38SubName: Full=Hexuronate transporter;
InterProD3QS38 
PFAMD3QS38 
ProdomD3QS38 
UniProtKBF4TJ61SubName: Full=Hexuronate transporter;
InterProF4TJ61 
PFAMF4TJ61 
ProdomF4TJ61 
UniProtKBC6UTY3SubName: Full=Hexuronate transporter;
InterProC6UTY3 
PFAMC6UTY3 
ProdomC6UTY3 
UniProtKBC4ZR09SubName: Full=Hexuronate transporter;
InterProC4ZR09 
PFAMC4ZR09 
ProdomC4ZR09 
UniProtKBC3STM7SubName: Full=Transport protein of hexuronates;
InterProC3STM7 
PFAMC3STM7 
ProdomC3STM7 
UniProtKBQ2M9B3Hexuronate transporter
InterProQ2M9B3 
PFAMQ2M9B3 
ProdomQ2M9B3 
UniProtKBC1NE73SubName: Full=Hexuronate transporter;
InterProC1NE73 
PFAMC1NE73 
ProdomC1NE73 
UniProtKBF9HYB8SubName: Full=ExuT3;
InterProF9HYB8 
PFAMF9HYB8 
ProdomF9HYB8 
UniProtKBB7NJV6SubName: Full=Hexuronate transporter;
InterProB7NJV6 
PFAMB7NJV6 
ProdomB7NJV6 
UniProtKBA0A1X3JD00SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:OSL04040.1}
InterProA0A1X3JD00 
PFAMA0A1X3JD00 
ProdomA0A1X3JD00 
UniProtKBA0A1X3IXC7SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:OSK92839.1}
InterProA0A1X3IXC7 
PFAMA0A1X3IXC7 
ProdomA0A1X3IXC7 
UniProtKBA0A1S9JPC8SubName: Full=Hexuronate transporter {ECO:0000313|EMBL:OOO84638.1}
InterProA0A1S9JPC8 
PFAMA0A1S9JPC8 
ProdomA0A1S9JPC8 
UniProtKBB7LH28SubName: Full=Hexuronate transporter;
InterProB7LH28 
PFAMB7LH28 
ProdomB7LH28 
UniProtKBI2QY51SubName: Full=Hexuronate transporter;
InterProI2QY51 
PFAMI2QY51 
ProdomI2QY51 
UniProtKBF4SN94SubName: Full=Hexuronate transporter;
InterProF4SN94 
PFAMF4SN94 
ProdomF4SN94 
UniProtKBI2A0E8SubName: Full=Transport protein of hexuronates;
InterProI2A0E8 
PFAMI2A0E8 
ProdomI2A0E8 
UniProtKBE8HKM7SubName: Full=Hexuronate transporter ExuT;
InterProE8HKM7 
PFAME8HKM7 
ProdomE8HKM7 
UniProtKBF4V6J8SubName: Full=Hexuronate transporter;
InterProF4V6J8 
PFAMF4V6J8 
ProdomF4V6J8 
UniProtKBE1HK72SubName: Full=D-galactonate transporter;
InterProE1HK72 
PFAME1HK72 
ProdomE1HK72 
UniProtKBD8ATA0SubName: Full=D-galactonate transporter;
InterProD8ATA0 
PFAMD8ATA0 
ProdomD8ATA0 
UniProtKBD6JEX5SubName: Full=Putative uncharacterized protein;
InterProD6JEX5 
PFAMD6JEX5 
ProdomD6JEX5 
UniProtKBE8IRQ2SubName: Full=Hexuronate transporter ExuT;
InterProE8IRQ2 
PFAME8IRQ2 
ProdomE8IRQ2 
UniProtKBP0AA79RecName: Full=Hexuronate transporter;
InterProP0AA79 
PFAMP0AA79 
ProdomP0AA79 
UniProtKBP42609RecName: Full=Hexuronate transporter;
InterProP42609 
PFAMP42609 
ProdomP42609 
UniProtKBQ2M9B3RecName: Full=Hexuronate transporter;
InterProQ2M9B3 
PFAMQ2M9B3 
ProdomQ2M9B3 
UniProtKBP0AA79.1EXUT_ECO57 RecName: Full=Hexuronate transporter
InterProP0AA79.1 
PFAMP0AA79.1 
ProdomP0AA79.1 
UniProtKBP0AA78.1EXUT_ECOLI RecName: Full=Hexuronate transporter
InterProP0AA78.1 
PFAMP0AA78.1 
ProdomP0AA78.1 
UniProtKBP0AA78RecName: Full=Hexuronate transporter;
InterProP0AA78 
PFAMP0AA78 
ProdomP0AA78 
RefSeqZP_03083696.1 hexuronate transporter [Escherichia coli O157:H7 str. EC4024]
RefSeqYP_001731955.1 hexuronate transporter [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_06655196.1 conserved hypothetical protein [Escherichia coli B354]
RefSeqAP_003642.1 hexuronate transporter [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_312002.1 transport protein of hexuronates [Escherichia coli O157:H7 str. Sakai]
RefSeqYP_003501289.1 Hexuronate transporter [Escherichia coli O55:H7 str. CB9615]
RefSeqNP_289667.1 transport of hexuronates [Escherichia coli O157:H7 EDL933]
RefSeqZP_07244770.1 D-galactonate transporter [Escherichia coli MS 146-1]
RefSeqZP_07164580.1 D-galactonate transporter [Escherichia coli MS 116-1]
RefSeqZP_05947495.1 hexuronate transporter ExuT [Escherichia coli O157:H7 str. FRIK966]
RefSeqZP_06659170.1 hexuronate transporter [Escherichia coli B185]
RefSeqZP_05942386.1 hexuronate transporter [Escherichia coli O157:H7 str. FRIK2000]
RefSeqYP_003079881.1 hexuronate transporter [Escherichia coli O157:H7 str. TW14359]
RefSeqZP_00735730.1 COG0477: Permeases of the major facilitator superfamily [Escherichia coli 53638]
RefSeqZP_00723309.1 COG0477: Permeases of the major facilitator superfamily [Escherichia coli E110019]
RefSeqZP_04872321.1 hexuronate transporter [Escherichia sp. 1_1_43]
RefSeqYP_002409493.1 hexuronate transporter [Escherichia coli IAI39]
RefSeqYP_002404464.1 hexuronate transporter [Escherichia coli 55989]
RefSeqYP_002927999.1 hexuronate transporter [Escherichia coli BW2952]
RefSeqZP_07170623.1 D-galactonate transporter [Escherichia coli MS 175-1]
RefSeqNP_417564.1 hexuronate transporter [Escherichia coli str. K-12 substr. MG1655]