University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K411
Original Database ID sp P78324
Organism Homo sapiens, synthetic construct
Annotation subname: full=cdna flj76712, highly
similar to homo sapiens signal-regulatory
pr otein alpha, transcript variant
1, mrna;
Sequence Length 503

Dataset Information:

The newest dataset for this sequence was created on 2010-10-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region35-335
Protein Length503
Template PDB Code1za6B
Template Region10-327
Sequence Identity24%
E-Value 1.3e-07
GA3411
MPQS0.65
z-DOPE0.61
Datasethuman_4-2007
ModPipe VersionModPipe2.0
Model Date2007-08-06

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1za6the structure of an antitumor ch2-domain-deleted humanized antibody
DBALI1za6B 
CATH2.60.40.10 Domain: 1za6B01 Immunoglobulins (92%)
CATH2.60.40.10 Domain: 1za6B02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1za6B03 Immunoglobulins (84%)
JenaImageLibrary1za6 
Target Sequence
UniProtKBP78324Protein tyrosine phosphatase, NON-receptor type substrate 1 precursorDE (SHP substrate-1) (Inhibitory receptor SHPS-1)
InterProP78324 
PFAMP78324 
ProdomP78324 
UniProtKBA8K411SubName: Full=cDNA FLJ76712, highly similar to Homo sapiens signal-regulatory protein alpha, transcript variant 1, mRNA;
InterProA8K411 
PFAMA8K411 
ProdomA8K411 
UniProtKBQ9Y4U9RecName: Full=Tyrosine-protein phosphatase non-receptor type substrate 1;Short=SHP substrate 1;Short=SHPS-1;AltName: Full=Inhibitory receptor SHPS-1;AltName: Full=Signal-regulatory protein alpha-1;Sho
InterProQ9Y4U9 
PFAMQ9Y4U9 
ProdomQ9Y4U9 
UniProtKBQ9UIJ6RecName: Full=Tyrosine-protein phosphatase non-receptor type substrate 1;Short=SHP substrate 1;Short=SHPS-1;AltName: Full=Inhibitory receptor SHPS-1;AltName: Full=Signal-regulatory protein alpha-1;Sho
InterProQ9UIJ6 
PFAMQ9UIJ6 
ProdomQ9UIJ6 
UniProtKBP78324.1SHPS1_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type substrate 1; Short=SHP substrate 1; Short=SHPS-1; AltName: Full=Brain Ig-like molecule with tyrosine-based activation motifs; S
InterProP78324.1 
PFAMP78324.1 
ProdomP78324.1 
GenPept7513333JC5287 SHP substrate-1 protein - human
GenPept568654712Sequence 11 from patent US 8613922
GenPept56576795Sequence 4 from patent US 6773895
GenPept49899261Signal-regulatory protein alpha
GenPept4758978 protein tyrosine phosphatase, non-receptor type substrate 1; SHP substrate-1 [Homo sapiens]
GenPept31691471Sequence 6 from patent US 6541615
GenPept123981496signal-regulatory protein alpha
GenPept158254988unnamed protein product
GenPept168279123tyrosine-protein phosphatase non-receptor type substrate 1 precursor, partial
GenPept112069353Sequence 37 from patent US 7074589
GenPept1864011SHPS-1
GenPept2052056SIRP-alpha1
GenPept23620474Signal-regulatory protein alpha
GenPept29427656SHPS1_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type substrate 1; Short=SHP substrate 1; Short=SHPS-1; AltName: Full=Brain Ig-like molecule with tyrosine-based activation motifs; S
GenBankAAH38510.1 Signal-regulatory protein alpha [Homo sapiens]
GenBankABM82577.1 signal-regulatory protein alpha [synthetic construct]
GenBankAAH75849.1 Signal-regulatory protein alpha [Homo sapiens]
EMBLCAA71403.1 
UCSCGenomeBrowserP78324