University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O95248
Original Database ID TR SBF1_HUMAN
Organism Homo sapiens
Annotation myotubularin-related protein 5
(set-binding factor 1) (sbf1)
Sequence Length 1866

Dataset Information:

The newest dataset for this sequence was created on 2005-03-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1763-1865
Protein Length1866
Template PDB Code1faoA
Template Region167-260
Sequence Identity30%
E-Value9e-15
GA3411
Datasetsnp-human2
ModPipe VersionModPipe1.0
Model Date2005-03-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1faostructure of the pleckstrin homology domain from dapp1/phish in complex with inositol 1,3,4,5-tetrakisphosphate ; PFAM: PF00169 ; SCOP: 26974
DBALI1faoA 
CATH2.30.29.30 Domain: 1faoA00 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) (94%)
JenaImageLibrary1fao 
Target Sequence
UniProtKBO60228Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProO60228 
PFAMO60228 
ProdomO60228 
UniProtKBO95248Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProO95248 
PFAMO95248 
ProdomO95248 
UniProtKBQ5JXD8Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProQ5JXD8 
PFAMQ5JXD8 
ProdomQ5JXD8 
UniProtKBQ5PPM2Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProQ5PPM2 
PFAMQ5PPM2 
ProdomQ5PPM2 
UniProtKBQ96GR9Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProQ96GR9 
PFAMQ96GR9 
ProdomQ96GR9 
UniProtKBQ9UGB8Myotubularin-related protein 5 (SET-binding factor 1) (Sbf1)
InterProQ9UGB8 
PFAMQ9UGB8 
ProdomQ9UGB8 
UCSCGenomeBrowserO95248