University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 551780
Original Database ID GI 551780
Organism Escherichia coli
Annotation orf, partial
Sequence Length 251

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region29-237
Protein Length251
Template PDB Code1y56B
Template Region7-204
Sequence Identity24%
E-Value0.001
GA3411
MPQS1.01517
z-DOPE0.56
TSVMod MethodMTALL
TSVMod RMSD16.065
TSVMod NO350.42
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1y56crystal structure of l-proline dehydrogenase from p.horikoshii
DBALI1y56B 
JenaImageLibrary1y56 
Target Sequence
GenPept551780ORF, partial
GenBankAAA23429.1 ORF [Escherichia coli]