University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q6QEF7
Original Database ID TR AAS48631
Organism Homo sapiens
Annotation subname: full=breast cancer anti-estrogen
resistance 1;
Sequence Length 888

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region6-63
Protein Length888
Template PDB Code1semA
Template Region157-211
Sequence Identity33%
E-Value1e-11
GA3410.98
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1semstructural determinants of peptide-binding orientation and of sequence specificity in sh3 domains ; PFAM: PF00018 ; SCOP: 24544
DBALI1semA 
CATH2.30.30.40 Domain: 1semA00 SH3 Domains (95%)
JenaImageLibrary1sem 
Target Sequence
UniProtKBQ6QEF7SubName: Full=Breast cancer anti-estrogen resistance 1;
InterProQ6QEF7 
PFAMQ6QEF7 
ProdomQ6QEF7 
UniProtKBQ6QEF7SubName: Full=Breast cancer anti-estrogen resistance 1;
InterProQ6QEF7 
PFAMQ6QEF7 
ProdomQ6QEF7 
GenPept44894163breast cancer anti-estrogen resistance 1
GenBankAAS48631.1 breast cancer anti-estrogen resistance 1 [Homo sapiens]
UCSCGenomeBrowserQ6QEF7