University of California San Francisco
|
About UCSF
|
UCSF Benioff Children's Hospital San Francisco
ModBase: Database of Comparative Protein Structure Models
Sali Lab Home
ModWeb
ModLoop
ModBase
ModEval
PCSS
FoXS
IMP
ModPipe
ModBase Home
ModBase Datasets for User:Anonymous
User Login
Help
News
Contact
Current Datasets
Model Details Page: SNP Information
Sequence Information
Primary Database Link
1621501
Original Database ID
gi 15559211
Organism
Homo sapiens
Annotation
rest protein
Sequence Length
1097
SNP Information
Perform action on this model
:
Alignment File (PIR Format)
Legacy Chimera (Structure/Alignment)
ChimeraX (Structure/Alignment)
Coordinate File (PDB)
Select option
Model Details (graphical)
Model Overview
Sequence Overview
Go to SNP View
SNP View
Genome
Browser
Residue
AA-Residue
Variants
Interface
Ligand
Stability
Validated
3 SNPs found but only 0 displayed. (SNPs in modeled regions)
Sequence Model Coverage summary
for all models of this sequence
Cross-references
Show obsolete/secondary identifiers
Mutation Data
LS-SNP
SNP Information available through LS-SNP
Template Structure
PDB
2gli
five-finger gli/dna complex ; PFAM:
PF00096
; SCOP:
45041
45042
45043
45044
45045
DBALI
2gliA
CATH
3.30.160.60
Domain: 2gliA01 Classic Zinc Finger (88%)
CATH
3.30.160.60
Domain: 2gliA02 Classic Zinc Finger (100%)
CATH
3.30.160.60
Domain: 2gliA03 Classic Zinc Finger (100%)
CATH
3.30.160.60
Domain: 2gliA04 Classic Zinc Finger (100%)
CATH
3.30.160.60
Domain: 2gliA05 Classic Zinc Finger (83%)
JenaImageLibrary
2gli
Target Sequence
UniProtKB
Q13127
REST protein
InterPro
Q13127
PFAM
Q13127
Prodom
Q13127
RefSeq
NP_005603.2
RE1-silencing transcription factor [Homo sapiens]
GenPept
15559211
RE1-silencing transcription factor [Homo sapiens]
GenPept
1621501
REST protein
GenPept
568527141
Sequence 647 from patent US 8586006
GenBank
AAB17211.1
REST protein [Homo sapiens]
UCSCGenomeBrowser
Q13127