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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q92729
Original Database ID gi 2499758
Organism Homo sapiens
Annotation recname: full=receptor-type tyrosine-protein
phosphatase u;short=r-ptp-u;ec=3.1.
3.48;altname: full=protein-tyrosine
phosphatase j;short=ptp-j;altname
...
Sequence Length 1430

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region280-571
Protein Length1430
Template PDB Code1tdqA
Template Region2-263
Sequence Identity17%
E-Value2e-22
GA3411
Datasetsnp-human3
ModPipe VersionModPipe1.0
Model Date2005-10-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1tdqstructural basis for the interactions between tenascins and the c-type lectin domains from lecticans: evidence for a cross-linking role for tenascins
DBALI1tdqA 
CATH2.60.40.10 Domain: 1tdqA01 Immunoglobulins (99%)
CATH2.60.40.10 Domain: 1tdqA02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1tdqA03 Immunoglobulins (91%)
JenaImageLibrary1tdq 
Target Sequence
UniProtKBQ92729RecName: Full=Receptor-type tyrosine-protein phosphatase U;Short=R-PTP-U;EC=3.1.3.48;AltName: Full=Protein-tyrosine phosphatase J;Short=PTP-J;AltName: Full=Pancreatic carcinoma phosphatase 2;Short=PCP
InterProQ92729 
PFAMQ92729 
ProdomQ92729 
GenPept1502343receptor phosphatase PCP-2
GenPept2499758PTPU_HUMAN PROTEIN-TYROSINE PHOSPHATASE U PRECURSOR (R-PTP-U) (PROTEIN-TYROSINE PHOSPHATASE J) (PTP-J) (PANCREATIC CARCI
GenPept5032003 protein tyrosine phosphatase, receptor type, U; protein tyrosine phosphatase J [Homo sapiens]
EMBLCAA65832.1 
UCSCGenomeBrowserQ92729