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Sequence Information

Primary Database Link A0A017JRQ1
Original Database ID ref NP_417153.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=putative hth-type
transcriptional regulator ygav
{eco:0000313|embl :eye01657.1};
Sequence Length 99

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-98
Protein Length99
Template PDB Code3cuoA
Template Region1-98
Sequence Identity100%
E-Value0
GA3411
MPQS2.2174
z-DOPE-1.35
TSVMod MethodMTALL
TSVMod RMSD1.865
TSVMod NO350.992
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3cuocrystal structure of the predicted dna-binding transcriptional regulator from e. coli
DBALI3cuoA 
CATH1.10.10.10 Domain: 3cuoA00 "winged helix" repressor DNA binding domain (100%)
JenaImageLibrary3cuo 
Target Sequence
UniProtKBB3WLU1SubName: Full=Transcriptional regulator, ArsR family;
InterProB3WLU1 
PFAMB3WLU1 
ProdomB3WLU1 
UniProtKBA0A026HF09SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYY80723.1};
InterProA0A026HF09 
PFAMA0A026HF09 
ProdomA0A026HF09 
UniProtKBA0A026RV44SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYZ96782.1};
InterProA0A026RV44 
PFAMA0A026RV44 
ProdomA0A026RV44 
UniProtKBA0A028A509SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE06407.1};
InterProA0A028A509 
PFAMA0A028A509 
ProdomA0A028A509 
UniProtKBA0A028BS34SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE25914.1};
InterProA0A028BS34 
PFAMA0A028BS34 
ProdomA0A028BS34 
UniProtKBA0A029HPN0SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EZJ38146.1};
InterProA0A029HPN0 
PFAMA0A029HPN0 
ProdomA0A029HPN0 
UniProtKBA0A029IMQ2SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EZJ49681.1};
InterProA0A029IMQ2 
PFAMA0A029IMQ2 
ProdomA0A029IMQ2 
UniProtKBA0A062Y1Y4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDA57093.1};
InterProA0A062Y1Y4 
PFAMA0A062Y1Y4 
ProdomA0A062Y1Y4 
UniProtKBA0A064T9T9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDG93361.1};
InterProA0A064T9T9 
PFAMA0A064T9T9 
ProdomA0A064T9T9 
UniProtKBA0A069XGE5SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDU29109.1};
InterProA0A069XGE5 
PFAMA0A069XGE5 
ProdomA0A069XGE5 
UniProtKBA0A069YQW1SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDU49662.1};
InterProA0A069YQW1 
PFAMA0A069YQW1 
ProdomA0A069YQW1 
UniProtKBA0A025CX91SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV19973.1};
InterProA0A025CX91 
PFAMA0A025CX91 
ProdomA0A025CX91 
UniProtKBA0A023Z1U8SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AHY71985.1};
InterProA0A023Z1U8 
PFAMA0A023Z1U8 
ProdomA0A023Z1U8 
UniProtKBB2N1L0SubName: Full=Transcriptional regulator, ArsR family;
InterProB2N1L0 
PFAMB2N1L0 
ProdomB2N1L0 
UniProtKBB3IQP3SubName: Full=Transcriptional regulator, ArsR family;
InterProB3IQP3 
PFAMB3IQP3 
ProdomB3IQP3 
UniProtKBB7MKD8SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR04178.1};
InterProB7MKD8 
PFAMB7MKD8 
ProdomB7MKD8 
UniProtKBB7MYW9SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR09286.2};
InterProB7MYW9 
PFAMB7MYW9 
ProdomB7MYW9 
UniProtKBB7N6Q1SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR14162.1};
InterProB7N6Q1 
PFAMB7N6Q1 
ProdomB7N6Q1 
UniProtKBB7LE84SubName: Full=YgaV protein {ECO:0000313|EMBL:CAU98810.1};
InterProB7LE84 
PFAMB7LE84 
ProdomB7LE84 
UniProtKBC6EJV8SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT28118.1};
InterProC6EJV8 
PFAMC6EJV8 
ProdomC6EJV8 
UniProtKBC4ZYR9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZYR9 
PFAMC4ZYR9 
ProdomC4ZYR9 
UniProtKBC6UC22SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6UC22 
PFAMC6UC22 
ProdomC6UC22 
UniProtKBC1NCL9SubName: Full=Transcriptional regulator;
InterProC1NCL9 
PFAMC1NCL9 
ProdomC1NCL9 
UniProtKBB3HDL6SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AIF64176.1};
InterProB3HDL6 
PFAMB3HDL6 
ProdomB3HDL6 
UniProtKBA0A070P153SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDW74139.1};
InterProA0A070P153 
PFAMA0A070P153 
ProdomA0A070P153 
UniProtKBA0A070PFG4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDW78890.1};
InterProA0A070PFG4 
PFAMA0A070PFG4 
ProdomA0A070PFG4 
UniProtKBA0A080I7C5SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEO22718.1};
InterProA0A080I7C5 
PFAMA0A080I7C5 
ProdomA0A080I7C5 
UniProtKBA0A0E0U1Z3SubName: Full=Transcriptional activator HlyU {ECO:0000313|EMBL:AEE57883.1};
InterProA0A0E0U1Z3 
PFAMA0A0E0U1Z3 
ProdomA0A0E0U1Z3 
UniProtKBA0A0E0V8C5SubName: Full=Tributyltin-inducible repressor of ygaVP {ECO:0000313|EMBL:AEQ13827.1};
InterProA0A0E0V8C5 
PFAMA0A0E0V8C5 
ProdomA0A0E0V8C5 
UniProtKBA0A0E1M4Z5SubName: Full=Tributyltin-inducible repressor of ygaVP {ECO:0000313|EMBL:AJF57484.1};
InterProA0A0E1M4Z5 
PFAMA0A0E1M4Z5 
ProdomA0A0E1M4Z5 
UniProtKBA0A0E1SRR5SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDU62230.1};
InterProA0A0E1SRR5 
PFAMA0A0E1SRR5 
ProdomA0A0E1SRR5 
UniProtKBA0A0G2XCM4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKI67890.1};
InterProA0A0G2XCM4 
PFAMA0A0G2XCM4 
ProdomA0A0G2XCM4 
UniProtKBA0A0G3J5E4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKK34266.1};
InterProA0A0G3J5E4 
PFAMA0A0G3J5E4 
ProdomA0A0G3J5E4 
UniProtKBA0A0G3KCF7SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKK49416.1};
InterProA0A0G3KCF7 
PFAMA0A0G3KCF7 
ProdomA0A0G3KCF7 
UniProtKBA0A0H2Z1V4SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:ABJ02101.1};
InterProA0A0H2Z1V4 
PFAMA0A0H2Z1V4 
ProdomA0A0H2Z1V4 
UniProtKBA0A0H4SH72SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKP85498.1};
InterProA0A0H4SH72 
PFAMA0A0H4SH72 
ProdomA0A0H4SH72 
UniProtKBA0A080GIF7SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN88958.1};
InterProA0A080GIF7 
PFAMA0A080GIF7 
ProdomA0A080GIF7 
UniProtKBA0A080F6A4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN54832.1};
InterProA0A080F6A4 
PFAMA0A080F6A4 
ProdomA0A080F6A4 
UniProtKBA0A080ELW6SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN47169.1};
InterProA0A080ELW6 
PFAMA0A080ELW6 
ProdomA0A080ELW6 
UniProtKBA0A070T525SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDX25006.1};
InterProA0A070T525 
PFAMA0A070T525 
ProdomA0A070T525 
UniProtKBA0A070UVF1SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDX46347.1};
InterProA0A070UVF1 
PFAMA0A070UVF1 
ProdomA0A070UVF1 
UniProtKBA0A071D3F9SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDZ35884.1};
InterProA0A071D3F9 
PFAMA0A071D3F9 
ProdomA0A071D3F9 
UniProtKBA0A073FTF8SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEJ45241.1};
InterProA0A073FTF8 
PFAMA0A073FTF8 
ProdomA0A073FTF8 
UniProtKBA0A073GQH0SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEJ67280.1};
InterProA0A073GQH0 
PFAMA0A073GQH0 
ProdomA0A073GQH0 
UniProtKBA0A073HJR7SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEJ73677.1};
InterProA0A073HJR7 
PFAMA0A073HJR7 
ProdomA0A073HJR7 
UniProtKBA0A073VR16SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEL82893.1};
InterProA0A073VR16 
PFAMA0A073VR16 
ProdomA0A073VR16 
UniProtKBA0A074HL46SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN96461.1};
InterProA0A074HL46 
PFAMA0A074HL46 
ProdomA0A074HL46 
UniProtKBA0A074IGX1SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEO08659.1};
InterProA0A074IGX1 
PFAMA0A074IGX1 
ProdomA0A074IGX1 
UniProtKBA0A079DJ27SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY20467.1};
InterProA0A079DJ27 
PFAMA0A079DJ27 
ProdomA0A079DJ27 
UniProtKBA0A0H9QBF5SubName: Full=ArsR family transcriptional regulator {ECO:0000313|EMBL:CSL35756.1};
InterProA0A0H9QBF5 
PFAMA0A0H9QBF5 
ProdomA0A0H9QBF5 
UniProtKBA0A0J3VU99SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KME68658.1};
InterProA0A0J3VU99 
PFAMA0A0J3VU99 
ProdomA0A0J3VU99 
UniProtKBB1IV06SubName: Full=Transcriptional regulator, ArsR family;
InterProB1IV06 
PFAMB1IV06 
ProdomB1IV06 
UniProtKBC8TFR5SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI26929.1};
InterProC8TFR5 
PFAMC8TFR5 
ProdomC8TFR5 
UniProtKBA1AEL1SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProA1AEL1 
PFAMA1AEL1 
ProdomA1AEL1 
UniProtKBA0A026V9A5SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZA38387.1};
InterProA0A026V9A5 
PFAMA0A026V9A5 
ProdomA0A026V9A5 
UniProtKBA0A029M4R6SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EZJ92126.1};
InterProA0A029M4R6 
PFAMA0A029M4R6 
ProdomA0A029M4R6 
UniProtKBA0A070FF75SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV64088.1};
InterProA0A070FF75 
PFAMA0A070FF75 
ProdomA0A070FF75 
UniProtKBA0A071BTG3SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY85399.1};
InterProA0A071BTG3 
PFAMA0A071BTG3 
ProdomA0A071BTG3 
UniProtKBA0A073TRN4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEL23078.1};
InterProA0A073TRN4 
PFAMA0A073TRN4 
ProdomA0A073TRN4 
UniProtKBA0A079FYL3SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY66932.1};
InterProA0A079FYL3 
PFAMA0A079FYL3 
ProdomA0A079FYL3 
UniProtKBA0A0A0FM92SubName: Full=Putative HTH-type transcriptional regulator YgaV {ECO:0000313|EMBL:KGM62707.1};
InterProA0A0A0FM92 
PFAMA0A0A0FM92 
ProdomA0A0A0FM92 
UniProtKBA0A0E2UK41SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE24686.1};
InterProA0A0E2UK41 
PFAMA0A0E2UK41 
ProdomA0A0E2UK41 
UniProtKBB7NSF0SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7NSF0 
PFAMB7NSF0 
ProdomB7NSF0 
UniProtKBB3X121SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDX34791.1};
InterProB3X121 
PFAMB3X121 
ProdomB3X121 
UniProtKBA0A0E2TGH1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV03895.1};
InterProA0A0E2TGH1 
PFAMA0A0E2TGH1 
ProdomA0A0E2TGH1 
UniProtKBA8A3E8SubName: Full=Transcriptional regulator, ArsR family;
InterProA8A3E8 
PFAMA8A3E8 
ProdomA8A3E8 
UniProtKBA0A0E1ZR91SubName: Full=ArsR family transcriptional regulator {ECO:0000313|EMBL:EIL30965.1};
InterProA0A0E1ZR91 
PFAMA0A0E1ZR91 
ProdomA0A0E1ZR91 
UniProtKBB1XCK5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XCK5 
PFAMB1XCK5 
ProdomB1XCK5 
UniProtKBA0A070XYX2SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDX84061.1};
InterProA0A070XYX2 
PFAMA0A070XYX2 
ProdomA0A070XYX2 
UniProtKBA0A0E2LFA2SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EQX25492.1};
InterProA0A0E2LFA2 
PFAMA0A0E2LFA2 
ProdomA0A0E2LFA2 
UniProtKBB7M9B0SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7M9B0 
PFAMB7M9B0 
ProdomB7M9B0 
UniProtKBA7ZQ98SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABV20846.1};
InterProA7ZQ98 
PFAMA7ZQ98 
ProdomA7ZQ98 
UniProtKBA0A029KGV2SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EZJ72558.1};
InterProA0A029KGV2 
PFAMA0A029KGV2 
ProdomA0A029KGV2 
UniProtKBA0A071AMA6SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY63453.1};
InterProA0A071AMA6 
PFAMA0A071AMA6 
ProdomA0A071AMA6 
UniProtKBA0A079F107SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY51319.1};
InterProA0A079F107 
PFAMA0A079F107 
ProdomA0A079F107 
UniProtKBA0A0H3MT62SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR18977.1};
InterProA0A0H3MT62 
PFAMA0A0H3MT62 
ProdomA0A0H3MT62 
UniProtKBB3XIQ5SubName: Full=Transcriptional regulator, ArsR family;
InterProB3XIQ5 
PFAMB3XIQ5 
ProdomB3XIQ5 
UniProtKBA0A071CB72SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDZ13748.1};
InterProA0A071CB72 
PFAMA0A071CB72 
ProdomA0A071CB72 
UniProtKBA0A073GA26SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEJ59471.1};
InterProA0A073GA26 
PFAMA0A073GA26 
ProdomA0A073GA26 
UniProtKBA0A073UVJ4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEL71781.1};
InterProA0A073UVJ4 
PFAMA0A073UVJ4 
ProdomA0A073UVJ4 
UniProtKBA0A074HVS5SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN98504.1};
InterProA0A074HVS5 
PFAMA0A074HVS5 
ProdomA0A074HVS5 
UniProtKBA0A079GX49SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDY96907.1};
InterProA0A079GX49 
PFAMA0A079GX49 
ProdomA0A079GX49 
UniProtKBA0A080FMW7SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEN66036.1};
InterProA0A080FMW7 
PFAMA0A080FMW7 
ProdomA0A080FMW7 
UniProtKBA0A0A8UH85SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK06456.1};
InterProA0A0A8UH85 
PFAMA0A0A8UH85 
ProdomA0A0A8UH85 
UniProtKBA0A0E0XWX2SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFS73154.1};
InterProA0A0E0XWX2 
PFAMA0A0E0XWX2 
ProdomA0A0E0XWX2 
UniProtKBA0A0G2SFH6SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AJM74869.1};
InterProA0A0G2SFH6 
PFAMA0A0G2SFH6 
ProdomA0A0G2SFH6 
UniProtKBA0A0G3JHJ4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKK40049.1};
InterProA0A0G3JHJ4 
PFAMA0A0G3JHJ4 
ProdomA0A0G3JHJ4 
UniProtKBA0A070SV66SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDX20629.1};
InterProA0A070SV66 
PFAMA0A070SV66 
ProdomA0A070SV66 
UniProtKBA0A070KFN4SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDW30691.1};
InterProA0A070KFN4 
PFAMA0A070KFN4 
ProdomA0A070KFN4 
UniProtKBA0A069WZU9SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KDU23110.1};
InterProA0A069WZU9 
PFAMA0A069WZU9 
ProdomA0A069WZU9 
UniProtKBB3IBM7SubName: Full=Transcriptional regulator, ArsR family;
InterProB3IBM7 
PFAMB3IBM7 
ProdomB3IBM7 
UniProtKBC1HJD1SubName: Full=Transcriptional regulator, ArsR family;
InterProC1HJD1 
PFAMC1HJD1 
ProdomC1HJD1 
UniProtKBC5W7Y3SubName: Full=Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT28118.1};
InterProC5W7Y3 
PFAMC5W7Y3 
ProdomC5W7Y3 
UniProtKBB6I658SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG78444.1};
InterProB6I658 
PFAMB6I658 
ProdomB6I658 
UniProtKBA0A017JRQ1SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EYE01657.1};
InterProA0A017JRQ1 
PFAMA0A017JRQ1 
ProdomA0A017JRQ1 
UniProtKBA0A025GQW3SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV65070.1};
InterProA0A025GQW3 
PFAMA0A025GQW3 
ProdomA0A025GQW3 
UniProtKBA0A027U7J2SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZD33591.1};
InterProA0A027U7J2 
PFAMA0A027U7J2 
ProdomA0A027U7J2 
UniProtKBA0A028ECM9SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE57678.1};
InterProA0A028ECM9 
PFAMA0A028ECM9 
ProdomA0A028ECM9 
UniProtKBA0A029PE24SubName: Full=Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:EZK20589.1};
InterProA0A029PE24 
PFAMA0A029PE24 
ProdomA0A029PE24 
UniProtKBA0A0H3X8R2SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKM36195.1};
InterProA0A0H3X8R2 
PFAMA0A0H3X8R2 
ProdomA0A0H3X8R2