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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P25054
Original Database ID gi 182397
Organism Homo sapiens
Annotation adenomatous polyposis coli protein
(protein apc)
Sequence Length 2843

Dataset Information:

The newest dataset for this sequence was created on 2016-06-02. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region326-736
Protein Length2843
Template PDB Code3nmzA
Template Region326-736
Sequence Identity100%
E-Value0
GA3411
MPQS1.37697
z-DOPE-1.52
TSVMod MethodMSALL
TSVMod RMSD2.339
TSVMod NO350.936
DatasetMW-APC_D4
ModPipe VersionSVN.r1600
Model Date2016-06-02

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3nmz
DBALI3nmzA 
JenaImageLibrary3nmz 
Target Sequence
UniProtKBD3DT03SubName: Full=HCG2031476, isoform CRA_a;
InterProD3DT03 
PFAMD3DT03 
ProdomD3DT03 
UniProtKBA0A224ANK2SubName: Full=Adenomatous polyposis coli protein isoform b {ECO:0000313|EMBL:BBA21111.1}
InterProA0A224ANK2 
PFAMA0A224ANK2 
ProdomA0A224ANK2 
UniProtKBP25054Adenomatous polyposis coli protein (Protein APC)
InterProP25054 
PFAMP25054 
ProdomP25054 
GenPept71865RBHUAP adenomatous polyposis coli protein - human
GenPept568654630Sequence 21 from patent US 8613907
GenPept53971995Sequence 1007 from patent US 6753314
GenPept4557319 adenomatosis polyposis coli [Homo sapiens]
GenPept3998967AR020149 Sequence 7 from patent US 5783666
GenPept3998963AR020145 Sequence 2 from patent US 5783666
GenPept119569387hCG2031476, isoform CRA_a
GenPept119569392hCG2031476, isoform CRA_a
GenPept12827021Sequence 2 from patent US 6114124
GenPept12827025Sequence 7 from patent US 6114124
GenPept182397APC
GenPept353295898Sequence 43 from patent US 8029984
GenPept114033APC_HUMAN ADENOMATOUS POLYPOSIS COLI PROTEIN (APC PROTEIN)
GenBankAAA03586.1 APC [Homo sapiens]
GenBankEAW49002.1 hCG2031476, isoform CRA_a [Homo sapiens]
GenBankEAW49007.1 hCG2031476, isoform CRA_a [Homo sapiens]
UCSCGenomeBrowserP25054