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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A090NKH5
Original Database ID TR P77688
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=transposase {eco:0000313|embl:esu80729.1};
Sequence Length 135

Dataset Information:

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Model Information

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Target Region21-132
Protein Length135
Template PDB Code6paxA
Template Region20-133
Sequence Identity14%
E-Value1e-07
GA3410.32
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB6paxcrystal structure of the human pax-6 paired domain-dna complex reveals a general model for pax protein-dna interactions ; PFAM: PF00292 ; SCOP: 64758 64759
DBALI6paxA 
CATH1.10.10.10 Domain: 6paxA01 "winged helix" repressor DNA binding domain (74%)
CATH1.10.10.10 Domain: 6paxA02 "winged helix" repressor DNA binding domain (100%)
JenaImageLibrary6pax 
Target Sequence
UniProtKBE9XW58SubName: Full=GylbG;
InterProE9XW58 
PFAME9XW58 
ProdomE9XW58 
UniProtKBF4NMR1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGJ07352.1};
InterProF4NMR1 
PFAMF4NMR1 
ProdomF4NMR1 
UniProtKBE9YDS6SubName: Full=GylbG {ECO:0000313|EMBL:EGB67368.1};
InterProE9YDS6 
PFAME9YDS6 
ProdomE9YDS6 
UniProtKBC6V040SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6V040 
PFAMC6V040 
ProdomC6V040 
UniProtKBE9WPX6SubName: Full=GylbG;
InterProE9WPX6 
PFAME9WPX6 
ProdomE9WPX6 
UniProtKBE9WBM9SubName: Full=YlbG protein;
InterProE9WBM9 
PFAME9WBM9 
ProdomE9WBM9 
UniProtKBD6I7M1SubName: Full=YlbG protein {ECO:0000313|EMBL:EFF06793.2};
InterProD6I7M1 
PFAMD6I7M1 
ProdomD6I7M1 
UniProtKBD3QKJ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADD55247.1};
InterProD3QKJ2 
PFAMD3QKJ2 
ProdomD3QKJ2 
UniProtKBA0A090NKH5SubName: Full=Transposase {ECO:0000313|EMBL:ESU80729.1};
InterProA0A090NKH5 
PFAMA0A090NKH5 
ProdomA0A090NKH5 
UniProtKBA0A0A6ZMU9SubName: Full=Transposase {ECO:0000313|EMBL:AHA63348.1};
InterProA0A0A6ZMU9 
PFAMA0A0A6ZMU9 
ProdomA0A0A6ZMU9 
UniProtKBA0A0F6F264SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJA24504.1};
InterProA0A0F6F264 
PFAMA0A0F6F264 
ProdomA0A0F6F264 
UniProtKBF4SJT0SubName: Full=Transposase {ECO:0000313|EMBL:EGI10043.1};
InterProF4SJT0 
PFAMF4SJT0 
ProdomF4SJT0 
UniProtKBF4TB35SubName: Full=Transposase {ECO:0000313|EMBL:EGI22793.1};
InterProF4TB35 
PFAMF4TB35 
ProdomF4TB35 
UniProtKBC3TKX7SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:ACI87361.1};
InterProC3TKX7 
PFAMC3TKX7 
ProdomC3TKX7 
UniProtKBF4TB35SubName: Full=Transposase;
InterProF4TB35 
PFAMF4TB35 
ProdomF4TB35 
UniProtKBQ7AGV8Hypothetical protein ECs0563
InterProQ7AGV8 
PFAMQ7AGV8 
ProdomQ7AGV8 
UniProtKBD6I7M1SubName: Full=YlbG protein;
InterProD6I7M1 
PFAMD6I7M1 
ProdomD6I7M1 
UniProtKBQ7DC27Hypothetical protein ECs0563
InterProQ7DC27 
PFAMQ7DC27 
ProdomQ7DC27 
UniProtKBC6V040SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6V040 
PFAMC6V040 
ProdomC6V040 
UniProtKBC3TKX7SubName: Full=Putative uncharacterized protein;
InterProC3TKX7 
PFAMC3TKX7 
ProdomC3TKX7 
UniProtKBA0A1X3JKV7SubName: Full=Transposase {ECO:0000313|EMBL:OSL15193.1}
InterProA0A1X3JKV7 
PFAMA0A1X3JKV7 
ProdomA0A1X3JKV7 
UniProtKBE9WBM9SubName: Full=YlbG protein;
InterProE9WBM9 
PFAME9WBM9 
ProdomE9WBM9 
UniProtKBQ79BC9Similar to A. pleuropneumoniae orf1
InterProQ79BC9 
PFAMQ79BC9 
ProdomQ79BC9 
UniProtKBE9WPX6SubName: Full=GylbG;
InterProE9WPX6 
PFAME9WPX6 
ProdomE9WPX6 
UniProtKBQ32J95Hypothetical protein
InterProQ32J95 
PFAMQ32J95 
ProdomQ32J95 
UniProtKBE9XW58SubName: Full=GylbG;
InterProE9XW58 
PFAME9XW58 
ProdomE9XW58 
UniProtKBP77688Hypothetical protein (Similar to A. pleuropneumoniae orf1)
InterProP77688 
PFAMP77688 
ProdomP77688 
UniProtKBE9YDS6SubName: Full=GylbG;
InterProE9YDS6 
PFAME9YDS6 
ProdomE9YDS6 
UniProtKBD3QKJ2SubName: Full=Putative uncharacterized protein ylbG;
InterProD3QKJ2 
PFAMD3QKJ2 
ProdomD3QKJ2 
UniProtKBF4NMR1SubName: Full=Putative uncharacterized protein;
InterProF4NMR1 
PFAMF4NMR1 
ProdomF4NMR1 
UniProtKBF4SJT0SubName: Full=Transposase;
InterProF4SJT0 
PFAMF4SJT0 
ProdomF4SJT0 
UniProtKBA0A1X3L5X9SubName: Full=Transposase {ECO:0000313|EMBL:OSL65266.1}
InterProA0A1X3L5X9 
PFAMA0A1X3L5X9 
ProdomA0A1X3L5X9 
RefSeqZP_06656411.1 ylbG protein [Escherichia coli B185]
RefSeqYP_003076529.1 predicted DNA-binding transcriptional regulator [Escherichia coli O157:H7 str. TW14359]
RefSeqYP_003498231.1 hypothetical protein G2583_0622 [Escherichia coli O55:H7 str. CB9615]
RefSeqYP_402101.1 hypothetical protein SDY_0400 [Shigella dysenteriae Sd197]
RefSeqNP_286250.1 hypothetical protein Z0656 [Escherichia coli O157:H7 EDL933]
GenPept12513394AE005231_5 orf, hypothetical protein
GenPept291433820ylbG protein
GenPept291281413 hypothetical protein G2583_0622 [Escherichia coli O55:H7 str. CB9615]
GenPept290761286hypothetical protein G2583_0622
GenPept254791692 predicted DNA-binding transcriptional regulator [Escherichia coli O157:H7 str. TW14359]
GenPept254591092predicted DNA-binding transcriptional regulator
GenPept209778106hypothetical protein ECs0563
GenPept209778104hypothetical protein ECs0563
GenPept209778102hypothetical protein ECs0563
GenPept209778100hypothetical protein ECs0563
GenPept209778098hypothetical protein ECs0563
GenPept1786711orf, hypothetical protein; putative regulator
GenPept1773183similar to A. pleuropneumoniae orf1
GenPept16128486 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept15829817 (NC_002695) hypothetical protein [Escherichia coli O157:H7]
GenPept15800238 hypothetical protein Z0656 [Escherichia coli O157:H7 EDL933]
GenPept13360021hypothetical protein
GenPept293413762 ylbG protein [Escherichia coli B185]
GenPept331037823transposase
GenPept331050736transposase
GenPept82775754 hypothetical protein SDY_0400 [Shigella dysenteriae Sd197]
GenPept81239902conserved hypothetical protein
GenPept7466104E64781 hypothetical protein b0502 - Escherichia coli
GenPept734587303hypothetical protein SS52_0597
GenPept666002298hypothetical protein SS17_0553
GenPept558571210Transposase
GenPept332104006hypothetical protein SSJG_03402
GenBankACI87364.1 hypothetical protein ECs0563 [Escherichia coli]
GenBankACI87365.1 hypothetical protein ECs0563 [Escherichia coli]
GenBankACT70453.1 predicted DNA-binding transcriptional regulator [Escherichia coli O157:H7 str. TW14359]
GenBankADD55247.1 hypothetical protein G2583_0622 [Escherichia coli O55:H7 str. CB9615]
GenBankACI87361.1 hypothetical protein ECs0563 [Escherichia coli]
GenBankABB60612.1 conserved hypothetical protein [Shigella dysenteriae Sd197]
GenBankAAG54858.1AE005231_5 orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
GenBankAAB40255.1 similar to A. pleuropneumoniae orf1 [Escherichia coli]
GenBankACI87363.1 hypothetical protein ECs0563 [Escherichia coli]
GenBankEFF06793.1 ylbG protein [Escherichia coli B185]
GenBankACI87362.1 hypothetical protein ECs0563 [Escherichia coli]