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ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link E9PFZ0
Original Database ID Custom ID
Organism Homo sapiens
Annotation recname: full=breast cancer type
1 susceptibility protein;ec=6.3.2.-;altname:
fu ll=ring finger protein 53;
Sequence Length 1863
 

SNP Information

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SNP ViewGenome
Browser		ResidueAA-Residue
Variants		InterfaceLigandStabilityValidated
rs28897699 Q1857 QH  
rs28897698 V1809 VF  
rs28897696 A1708 AE  
rs28897695 F1662 FC  
rs1799967 M1652 MI   X
rs28897694 V1646 VD  
46 SNPs found but only 6 displayed. (SNPs in modeled regions)
 

Sequence Model Coverage summary
for all models of this sequence

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB4igk
DBALI4igkA 
JenaImageLibrary4igk 
Target Sequence
UniProtKBP38398RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProP38398 
PFAMP38398 
ProdomP38398 
UniProtKBQ3LRJ0RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ3LRJ0 
PFAMQ3LRJ0 
ProdomQ3LRJ0 
UniProtKBQ3LRJ6RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ3LRJ6 
PFAMQ3LRJ6 
ProdomQ3LRJ6 
UniProtKBO15129RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProO15129 
PFAMO15129 
ProdomO15129 
UniProtKBQ6IN79RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ6IN79 
PFAMQ6IN79 
ProdomQ6IN79 
UniProtKBQ7KYU9RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ7KYU9 
PFAMQ7KYU9 
ProdomQ7KYU9 
UniProtKBQ3LRJ6SubName: Full=Breast cancer 1 early onset;
InterProQ3LRJ6 
PFAMQ3LRJ6 
ProdomQ3LRJ6 
UniProtKBE9PFZ0RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProE9PFZ0 
PFAME9PFZ0 
ProdomE9PFZ0 
UniProtKBP38398RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProP38398 
PFAMP38398 
ProdomP38398 
UniProtKBO15129RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProO15129 
PFAMO15129 
ProdomO15129 
UniProtKBP38398.2BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein; AltName: Full=RING finger protein 53
InterProP38398.2 
PFAMP38398.2 
ProdomP38398.2 
UniProtKBQ1RMC1RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ1RMC1 
PFAMQ1RMC1 
ProdomQ1RMC1 
UniProtKBQ3LRJ0RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ3LRJ0 
PFAMQ3LRJ0 
ProdomQ3LRJ0 
UniProtKBQ7KYU9RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ7KYU9 
PFAMQ7KYU9 
ProdomQ7KYU9 
UniProtKBQ3LRJ6RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ3LRJ6 
PFAMQ3LRJ6 
ProdomQ3LRJ6 
UniProtKBQ6IN79RecName: Full=Breast cancer type 1 susceptibility protein;EC=6.3.2.-;AltName: Full=RING finger protein 53;
InterProQ6IN79 
PFAMQ6IN79 
ProdomQ6IN79 
RefSeqNP_009225.1 breast cancer type 1 susceptibility protein isoform 1 [Homo sapiens]
RefSeqNP_009226.1 breast cancer 1, early onset isoform 1 [Homo sapiens]
RefSeqNP_009227.1 breast cancer 1, early onset isoform 1 [Homo sapiens]
GenPept333689303Sequence 19 from patent US 7943732
GenPept75875069breast cancer 1 early onset
GenPept75874961breast cancer 1 early onset
GenPept75874871breast cancer 1 early onset
GenPept75874675breast cancer 1 early onset
GenPept75874617breast cancer 1 early onset
GenPept75874527breast cancer 1 early onset
GenPept756757573Sequence 19 from patent US 8815530
GenPept555932breast and ovarian cancer susceptibility
GenPept53972086Sequence 1098 from patent US 6753314
GenPept516170026Sequence 716 from patent US 8470798
GenPept47267011Sequence 2 from patent US 6720158
GenPept407102845Sequence 19 from patent US 8263357
GenPept3994270AR008672 Sequence 2 from patent US 5753441
GenPept3992676AR005620 Sequence 2 from patent US 5747282
GenPept389969749Sequence 716 from patent US 8193332
GenPept339425419Sequence 8 from patent US 7968293
GenPept3209873I81576 Sequence 2 from patent US 5710001
GenPept3209867I81570 Sequence 2 from patent US 5709999
GenPept3014969I78815 Sequence 2 from patent US 5693473
GenPept30039659breast cancer 1, early onset
GenPept1698399BRCA1
GenPept168278014breast cancer type 1 susceptibility protein, partial
GenPept568654640Sequence 40 from patent US 8613907
GenPept6552299 breast cancer type 1 susceptibility protein isoform 1 [Homo sapiens]
GenPept14478556Sequence 2 from patent US 6162897
GenPept756374506Sequence 716 from patent US 8703930
GenPept6552301 breast cancer 1, early onset; breast-ovarian cancer, included [Homo sapiens]
GenPept7428553A58881 breast/ovarian cancer susceptibility protein BRCA1 - human
GenPept728984BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein; AltName: Full=RING finger protein 53
GenPept6552303 breast cancer 1, early onset; breast-ovarian cancer, included [Homo sapiens]
GenBankAAA73985.1 breast and ovarian cancer susceptibility [Homo sapiens]
GenBankAAC37594.1 BRCA1 [Homo sapiens]
GenBankAAP12647.1 breast cancer 1, early onset [Homo sapiens]
GenBankABA29208.1 breast cancer 1 early onset [Homo sapiens]
GenBankABA29211.1 breast cancer 1 early onset [Homo sapiens]
GenBankABA29214.1 breast cancer 1 early onset [Homo sapiens]
GenBankABA29220.1 breast cancer 1 early onset [Homo sapiens]
GenBankABA29223.1 breast cancer 1 early onset [Homo sapiens]
GenBankABA29226.1 breast cancer 1 early onset [Homo sapiens]
ENSEMBLENSP00000337814Breast cancer type 1 susceptibility protein (RING finger protein 53). [Homo sapiens]
ENSEMBLENSP00000350283Breast cancer type 1 susceptibility protein (RING finger protein 53). [Homo sapiens]
UCSCGenomeBrowserP38398 
ENSEMBLENSP00000337814 
ENSEMBLENSP00000350283 
ENSEMBLENSP00000350283TDI sequence
ENSEMBLENSP00000350283