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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O15194
Original Database ID gi 2289786
Organism Homo sapiens
Annotation nuclear lim interactor-interacting
factor 1 (nli-interacting factor
1)de (nif- like protein) (ya22
protein) (hya22)
Sequence Length 340

Dataset Information:

The newest dataset for this sequence was created on 2007-07-17. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region159-337
Protein Length340
Template PDB Code2q5eA
Template Region90-268
Sequence Identity82%
E-Value2e-59
GA3411
Datasetnysgxrc_2q5e_707
ModPipe VersionModPipe1.0
Model Date2007-07-17

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2q5ecrystal structure of human carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase 2
DBALI2q5eA 
CATH3.40.50.1000 Domain: 2q5eA00 Rossmann fold (99%)
JenaImageLibrary2q5e 
Target Sequence
UniProtKBO15194Nuclear LIM interactor-interacting factor 1 (NLI-interacting factor 1)DE (NIF-like protein) (YA22 protein) (HYA22)
InterProO15194 
PFAMO15194 
ProdomO15194 
RefSeqXP_009443454.3LOW QUALITY PROTEIN: CTD small phosphatase-like protein
GenPept17865502NIF1_HUMAN Nuclear LIM interactor-interacting factor 1 (NLI-interacting factor 1) (NIF-like protein) (YA22 protein) (HYA
GenPept2289786HYA22
GenPept5031775 HYA22 protein [Homo sapiens]
UCSCGenomeBrowserO15194