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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2UIJ4
Original Database ID ref NP_418144.3
Organism Escherichia coli, Shigella sonnei, etc.
Annotation putative uncharacterized protein.
Sequence Length 415

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region305-414
Protein Length415
Template PDB Code2ojhA
Template Region91-203
Sequence Identity27%
E-Value0.77
GA3410.87
MPQS0.47916
z-DOPE-0.25
TSVMod MethodMSALL
TSVMod RMSD4.711
TSVMod NO350.681
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2ojhthe structure of putative tolb from agrobacterium tumefaciens
DBALI2ojhA 
CATH2.120.10.30 Domain: 2ojhA00 TolB, C-terminal domain (39%)
JenaImageLibrary2ojh 
Target Sequence
UniProtKBQ2M801RecName: Full=Uncharacterized protein YidR;
InterProQ2M801 
PFAMQ2M801 
ProdomQ2M801 
UniProtKBP76734RecName: Full=Uncharacterized protein YidR;
InterProP76734 
PFAMP76734 
ProdomP76734 
UniProtKBP31455RecName: Full=Uncharacterized protein YidR;
InterProP31455 
PFAMP31455 
ProdomP31455 
UniProtKBA0A090HXL4SubName: Full=Uncharacterized protein;
InterProA0A090HXL4 
PFAMA0A090HXL4 
ProdomA0A090HXL4 
UniProtKBA2UIJ4Putative uncharacterized protein.
InterProA2UIJ4 
PFAMA2UIJ4 
ProdomA2UIJ4 
UniProtKBA0A7B5MCC7SubName: Full=DUF3748 domain-containing protein {ECO:0000313|EMBL:HAJ6402623.1}
InterProA0A7B5MCC7 
PFAMA0A7B5MCC7 
ProdomA0A7B5MCC7 
UniProtKBA0A7D4ME21SubName: Full=DUF3748 domain-containing protein {ECO:0000313|EMBL:QKI53136.1}
InterProA0A7D4ME21 
PFAMA0A7D4ME21 
ProdomA0A7D4ME21 
UniProtKBA0A7Z8FII4SubName: Full=DUF3748 domain-containing protein {ECO:0000313|EMBL:TFB47754.1}
InterProA0A7Z8FII4 
PFAMA0A7Z8FII4 
ProdomA0A7Z8FII4 
UniProtKBA0A5Q3TJ71SubName: Full=DUF3748 domain-containing protein {ECO:0000313|EMBL:QGL44562.1}
InterProA0A5Q3TJ71 
PFAMA0A5Q3TJ71 
ProdomA0A5Q3TJ71 
UniProtKBP76734RecName: Full=Uncharacterized protein YidR;
InterProP76734 
PFAMP76734 
ProdomP76734 
UniProtKBQ2M801RecName: Full=Uncharacterized protein YidR;
InterProQ2M801 
PFAMQ2M801 
ProdomQ2M801 
UniProtKBP31455RecName: Full=Uncharacterized protein YidR;
InterProP31455 
PFAMP31455 
ProdomP31455 
RefSeqZP_01700182.1 conserved hypothetical protein [Escherichia coli B]
GenPept817593420DUF3748 family protein
GenPept817589280DUF3748 family protein
GenPept124529036 conserved hypothetical protein [Escherichia coli B]
GenPept308199520DUF3748 family protein
GenPept549815021yidR
GenPept682121087DUF3748 family protein
GenPept687674360conserved protein
GenPept687678786conserved protein
GenPept124500175 conserved hypothetical protein [Escherichia coli B]
GenPept730584891hypothetical protein ER2796_3802
GenPept731472619hypothetical protein ER3413_3802
GenPept802136992hypothetical protein b3689
GenPept817576858DUF3748 family protein
GenPept817581000DUF3748 family protein
GenPept817585139DUF3748 family protein
GenBankEAY47652.1 conserved hypothetical protein [Escherichia coli B]