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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 61679979
Original Database ID UP P22256
Organism Escherichia coli
Annotation d chain d, the structure of gamma-aminobutyrate
aminotransferase mutant: i50q
Sequence Length 426

Dataset Information:

The newest dataset for this sequence was created on 2014-10-14. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-426
Protein Length426
Template PDB Code1sffA
Template Region2-426
Sequence Identity100%
E-Value0
GA3411
MPQS2.20645
z-DOPE-1.18
TSVMod MethodMTALL
TSVMod RMSD0.17
TSVMod NO351
DatasetMW-EFI_update_D69
ModPipe VersionSVN.r1596
Model Date2014-10-14

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1sffstructure of gamma-aminobutyrate aminotransferase complex with aminooxyacetate
DBALI1sffA 
CATH3.90.1150.10 Domain: 1sffA01 Aspartate Aminotransferase, domain 1 (100%)
CATH3.40.640.10 Domain: 1sffA02 Type I PLP-dependent aspartate aminotransferase-like (Major domain) (100%)
JenaImageLibrary1sff 
Target Sequence
PDB1SZSD Chain D, The Structure Of Gamma-Aminobutyrate Aminotransferase Mutant: I50q
PDB1SZSAChain A, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
PDB1SZSBChain B, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
PDB1SZSCChain C, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
PDB1SZSDChain D, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
GenPept61679978C Chain C, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
GenPept61679977B Chain B, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
GenPept61679976A Chain A, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q
GenPept443779610Sequence 31907 from patent US 8343764
GenPept61679979D Chain D, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q