University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q05655
Original Database ID gi 547803
Organism Homo sapiens
Annotation recname: full=protein kinase c
delta type;ec=2.7.11.13;altname:
full=npkc-delta;
Sequence Length 676

Dataset Information:

The newest dataset for this sequence was created on 2008-07-11. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region348-622
Protein Length676
Template PDB Code3ckxA
Template Region8-278
Sequence Identity26%
E-Value4e-97
GA3411
Datasetnysgxrc_3CKX_708
ModPipe Version
Model Date2008-07-11

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3ckxcrystal structure of sterile 20-like kinase 3 (mst3, stk24) in complex with staurosporine
DBALI3ckxA 
CATH3.30.200.20 Domain: 3ckxA01 Phosphorylase Kinase; domain 1 (96%)
CATH1.10.510.10 Domain: 3ckxA02 Transferase(Phosphotransferase) domain 1 (97%)
JenaImageLibrary3ckx 
Target Sequence
UniProtKBQ15144RecName: Full=Protein kinase C delta type;EC=2.7.11.13;AltName: Full=nPKC-delta;
InterProQ15144 
PFAMQ15144 
ProdomQ15144 
UniProtKBQ05655RecName: Full=Protein kinase C delta type;EC=2.7.11.13;AltName: Full=nPKC-delta;
InterProQ05655 
PFAMQ05655 
ProdomQ05655 
GenPept76000258Sequence 209 from patent US 6936450
GenPept547803KPCD_HUMAN PROTEIN KINASE C, DELTA TYPE (NPKC-DELTA)
GenPept5453970 protein kinase C, delta [Homo sapiens]
GenPept479959S35705 protein kinase C (EC 2.7.1.-) delta 13 - human
GenPept314387474Sequence 124 from patent US 7792665
GenPept189680protein kinase C-delta 13
GenPept15121699Sequence 2 from patent US 6235723
GenBankAAA03176.1 protein kinase C-delta 13 [Homo sapiens]
UCSCGenomeBrowserQ05655