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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A017JQ98
Original Database ID ref NP_417426.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=uncharacterized
protein {eco:0000313|embl:eye00814.1};
Sequence Length 234

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region1-228
Protein Length234
Template PDB Code3sy1A
Template Region2-229
Sequence Identity96%
E-Value0
GA3411
MPQS2.20456
z-DOPE-1.76
TSVMod MethodMSALL
TSVMod RMSD0.41
TSVMod NO350.957
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3sy1
DBALI3sy1A 
JenaImageLibrary3sy1 
Target Sequence
UniProtKBB3BDT7SubName: Full=Alanine racemase family;
InterProB3BDT7 
PFAMB3BDT7 
ProdomB3BDT7 
UniProtKBA0A028AEH2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE09285.1};
InterProA0A028AEH2 
PFAMA0A028AEH2 
ProdomA0A028AEH2 
UniProtKBA0A028BLM9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE24004.1};
InterProA0A028BLM9 
PFAMA0A028BLM9 
ProdomA0A028BLM9 
UniProtKBA0A029PDZ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK19958.1};
InterProA0A029PDZ2 
PFAMA0A029PDZ2 
ProdomA0A029PDZ2 
UniProtKBA0A062Y7M2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDA56775.1};
InterProA0A062Y7M2 
PFAMA0A062Y7M2 
ProdomA0A062Y7M2 
UniProtKBA0A069X611SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU25194.1};
InterProA0A069X611 
PFAMA0A069X611 
ProdomA0A069X611 
UniProtKBA0A069XH54SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU29224.1};
InterProA0A069XH54 
PFAMA0A069XH54 
ProdomA0A069XH54 
UniProtKBA0A070FG29SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV63781.1};
InterProA0A070FG29 
PFAMA0A070FG29 
ProdomA0A070FG29 
UniProtKBA0A070KEC7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW30084.1};
InterProA0A070KEC7 
PFAMA0A070KEC7 
ProdomA0A070KEC7 
UniProtKBA0A070T5N4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX24379.1};
InterProA0A070T5N4 
PFAMA0A070T5N4 
ProdomA0A070T5N4 
UniProtKBA0A070UUX0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX45720.1};
InterProA0A070UUX0 
PFAMA0A070UUX0 
ProdomA0A070UUX0 
UniProtKBA0A027U9F5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD33892.1};
InterProA0A027U9F5 
PFAMA0A027U9F5 
ProdomA0A027U9F5 
UniProtKBA0A026S1Z5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYZ99031.1};
InterProA0A026S1Z5 
PFAMA0A026S1Z5 
ProdomA0A026S1Z5 
UniProtKBB1IT56SubName: Full=Alanine racemase domain protein;
InterProB1IT56 
PFAMB1IT56 
ProdomB1IT56 
UniProtKBA8A493SubName: Full=Alanine racemase family;
InterProA8A493 
PFAMA8A493 
ProdomA8A493 
UniProtKBA7ZR75SubName: Full=Alanine racemase family {ECO:0000313|EMBL:ABV17692.1};
InterProA7ZR75 
PFAMA7ZR75 
ProdomA7ZR75 
UniProtKBB3Y165SubName: Full=Predicted protein {ECO:0000313|EMBL:BAG66689.1};
InterProB3Y165 
PFAMB3Y165 
ProdomB3Y165 
UniProtKBB5YQE9SubName: Full=Pyridoxal phosphate enzyme, YggS family;
InterProB5YQE9 
PFAMB5YQE9 
ProdomB5YQE9 
UniProtKBB3IFM6SubName: Full=Alanine racemase family;
InterProB3IFM6 
PFAMB3IFM6 
ProdomB3IFM6 
UniProtKBB7UHZ8SubName: Full=Predicted enzyme {ECO:0000313|EMBL:CAS10752.1};
InterProB7UHZ8 
PFAMB7UHZ8 
ProdomB7UHZ8 
UniProtKBB7LYY1SubName: Full=Putative enzyme;
InterProB7LYY1 
PFAMB7LYY1 
ProdomB7LYY1 
UniProtKBC1NDG1SubName: Full=Pyridoxal phosphate enzyme;
InterProC1NDG1 
PFAMC1NDG1 
ProdomC1NDG1 
UniProtKBB7LFL4SubName: Full=YggS protein {ECO:0000313|EMBL:CAU99241.1};
InterProB7LFL4 
PFAMB7LFL4 
ProdomB7LFL4 
UniProtKBB2U0X1SubName: Full=Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:ACD07747.1};
InterProB2U0X1 
PFAMB2U0X1 
ProdomB2U0X1 
UniProtKBA0A071BZB6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY89401.1};
InterProA0A071BZB6 
PFAMA0A071BZB6 
ProdomA0A071BZB6 
UniProtKBA0A071CHS9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ18403.1};
InterProA0A071CHS9 
PFAMA0A071CHS9 
ProdomA0A071CHS9 
UniProtKBA0A0E2TQ43SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV12172.1};
InterProA0A0E2TQ43 
PFAMA0A0E2TQ43 
ProdomA0A0E2TQ43 
UniProtKBA0A0F6C8S8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ30634.1};
InterProA0A0F6C8S8 
PFAMA0A0F6C8S8 
ProdomA0A0F6C8S8 
UniProtKBA0A0F6FC07SubName: Full=Proline synthase-like protein {ECO:0000313|EMBL:AJA27947.1};
InterProA0A0F6FC07 
PFAMA0A0F6FC07 
ProdomA0A0F6FC07 
UniProtKBA0A0G2XG58SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKI68056.1};
InterProA0A0G2XG58 
PFAMA0A0G2XG58 
ProdomA0A0G2XG58 
UniProtKBA0A0G3I1A9SubName: Full=Putative enzyme, binds pyridoxal 5'-phosphate protein {ECO:0000313|EMBL:AKK18760.1};
InterProA0A0G3I1A9 
PFAMA0A0G3I1A9 
ProdomA0A0G3I1A9 
UniProtKBA0A0H4S220SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP85821.1};
InterProA0A0H4S220 
PFAMA0A0H4S220 
ProdomA0A0H4S220 
UniProtKBA0A0H9WU58SubName: Full=Pyridoxal phosphate enzyme%2C YggS family {ECO:0000313|EMBL:CSM15731.1};
InterProA0A0H9WU58 
PFAMA0A0H9WU58 
ProdomA0A0H9WU58 
UniProtKBB2NN60SubName: Full=Alanine racemase family;
InterProB2NN60 
PFAMB2NN60 
ProdomB2NN60 
UniProtKBB2PMM7SubName: Full=Alanine racemase family;
InterProB2PMM7 
PFAMB2PMM7 
ProdomB2PMM7 
UniProtKBB3AIN3SubName: Full=Alanine racemase family;
InterProB3AIN3 
PFAMB3AIN3 
ProdomB3AIN3 
UniProtKBA0A0E2A4Z3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL43110.1};
InterProA0A0E2A4Z3 
PFAMA0A0E2A4Z3 
ProdomA0A0E2A4Z3 
UniProtKBA0A0E0XUI1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS72858.1};
InterProA0A0E0XUI1 
PFAMA0A0E0XUI1 
ProdomA0A0E0XUI1 
UniProtKBA0A0E0V987SubName: Full=Putative enzyme, binds pyridoxal 5'-phosphate {ECO:0000313|EMBL:AEQ14122.1};
InterProA0A0E0V987 
PFAMA0A0E0V987 
ProdomA0A0E0V987 
UniProtKBA0A073FSQ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ44980.1};
InterProA0A073FSQ5 
PFAMA0A073FSQ5 
ProdomA0A073FSQ5 
UniProtKBA0A073GAC1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ59140.1};
InterProA0A073GAC1 
PFAMA0A073GAC1 
ProdomA0A073GAC1 
UniProtKBA0A074HNN3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN95973.1};
InterProA0A074HNN3 
PFAMA0A074HNN3 
ProdomA0A074HNN3 
UniProtKBA0A074ICB6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN98044.1};
InterProA0A074ICB6 
PFAMA0A074ICB6 
ProdomA0A074ICB6 
UniProtKBA0A079DDY8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY18717.1};
InterProA0A079DDY8 
PFAMA0A079DDY8 
ProdomA0A079DDY8 
UniProtKBA0A079F4B7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY51583.1};
InterProA0A079F4B7 
PFAMA0A079F4B7 
ProdomA0A079F4B7 
UniProtKBA0A080EP42SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN46779.1};
InterProA0A080EP42 
PFAMA0A080EP42 
ProdomA0A080EP42 
UniProtKBA0A080FLS9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN65526.1};
InterProA0A080FLS9 
PFAMA0A080FLS9 
ProdomA0A080FLS9 
UniProtKBA0A080HXR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO22609.1};
InterProA0A080HXR3 
PFAMA0A080HXR3 
ProdomA0A080HXR3 
UniProtKBA0A080IMY4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO30087.1};
InterProA0A080IMY4 
PFAMA0A080IMY4 
ProdomA0A080IMY4 
UniProtKBB3AXZ3SubName: Full=Alanine racemase family;
InterProB3AXZ3 
PFAMB3AXZ3 
ProdomB3AXZ3 
UniProtKBB3HG12SubName: Full=UPF0001 protein yggS {ECO:0000313|EMBL:AIF63812.1};
InterProB3HG12 
PFAMB3HG12 
ProdomB3HG12 
UniProtKBA0A017JQ98SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYE00814.1};
InterProA0A017JQ98 
PFAMA0A017JQ98 
ProdomA0A017JQ98 
UniProtKBC3SV52SubName: Full=Proline synthetase co-transcribed bacterial-like protein {ECO:0000313|EMBL:AJE57498.1};SubName: Full=Putative enzyme, binds pyridoxal 5'-phosphate {ECO:0000313|EMBL:CCQ30371.2};SubName:
InterProC3SV52 
PFAMC3SV52 
ProdomC3SV52 
UniProtKBA0A025FHK5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV52147.1};
InterProA0A025FHK5 
PFAMA0A025FHK5 
ProdomA0A025FHK5 
UniProtKBA0A028DQ14SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE49634.1};
InterProA0A028DQ14 
PFAMA0A028DQ14 
ProdomA0A028DQ14 
UniProtKBA0A070CJ29SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV28102.1};
InterProA0A070CJ29 
PFAMA0A070CJ29 
ProdomA0A070CJ29 
UniProtKBA0A070Y945SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX87671.1};
InterProA0A070Y945 
PFAMA0A070Y945 
ProdomA0A070Y945 
UniProtKBA0A073TAD8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL22964.1};
InterProA0A073TAD8 
PFAMA0A073TAD8 
ProdomA0A073TAD8 
UniProtKBA0A079FIM8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY58782.1};
InterProA0A079FIM8 
PFAMA0A079FIM8 
ProdomA0A079FIM8 
UniProtKBA0A0A8UI69SubName: Full=Putative enzyme {ECO:0000313|EMBL:CEK06771.1};
InterProA0A0A8UI69 
PFAMA0A0A8UI69 
ProdomA0A0A8UI69 
UniProtKBA0A0E2U546SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE24788.1};
InterProA0A0E2U546 
PFAMA0A0E2U546 
ProdomA0A0E2U546 
UniProtKBA0A0H3PWJ4SubName: Full=Alanine racemase family {ECO:0000313|EMBL:EDU92482.1};
InterProA0A0H3PWJ4 
PFAMA0A0H3PWJ4 
ProdomA0A0H3PWJ4 
UniProtKBB6I6X9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG78743.1};
InterProB6I6X9 
PFAMB6I6X9 
ProdomB6I6X9 
UniProtKBB3BS31SubName: Full=Alanine racemase family;
InterProB3BS31 
PFAMB3BS31 
ProdomB3BS31 
UniProtKBA0A0H3MU86SubName: Full=Putative enzyme {ECO:0000313|EMBL:CAR19486.1};
InterProA0A0H3MU86 
PFAMA0A0H3MU86 
ProdomA0A0H3MU86 
UniProtKBA0A023Z2H1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AHY72306.1};
InterProA0A023Z2H1 
PFAMA0A023Z2H1 
ProdomA0A023Z2H1 
UniProtKBA0A0G3JKI5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK40337.1};
InterProA0A0G3JKI5 
PFAMA0A0G3JKI5 
ProdomA0A0G3JKI5 
UniProtKBA0A024KPT7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP66475.1};
InterProA0A024KPT7 
PFAMA0A024KPT7 
ProdomA0A024KPT7 
UniProtKBA0A073GM70SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ66768.1};
InterProA0A073GM70 
PFAMA0A073GM70 
ProdomA0A073GM70 
UniProtKBA0A0G3K6X3SubName: Full=Putative enzyme {ECO:0000313|EMBL:AKK49735.1};
InterProA0A0G3K6X3 
PFAMA0A0G3K6X3 
ProdomA0A0G3K6X3 
UniProtKBB3WHJ0SubName: Full=Pyridoxal phosphate enzyme, YggS family;
InterProB3WHJ0 
PFAMB3WHJ0 
ProdomB3WHJ0 
UniProtKBA0A025CRU2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV18364.1};
InterProA0A025CRU2 
PFAMA0A025CRU2 
ProdomA0A025CRU2 
UniProtKBA0A069YUG7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU50911.1};
InterProA0A069YUG7 
PFAMA0A069YUG7 
ProdomA0A069YUG7 
UniProtKBA0A073H7S8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ73429.1};
InterProA0A073H7S8 
PFAMA0A073H7S8 
ProdomA0A073H7S8 
UniProtKBA0A090NEM7SubName: Full=Putative cytosolic protein {ECO:0000313|EMBL:ESU78139.1};
InterProA0A090NEM7 
PFAMA0A090NEM7 
ProdomA0A090NEM7 
UniProtKBB1XFB1SubName: Full=Predicted enzyme;
InterProB1XFB1 
PFAMB1XFB1 
ProdomB1XFB1 
UniProtKBB3A2Y0SubName: Full=Alanine racemase family;
InterProB3A2Y0 
PFAMB3A2Y0 
ProdomB3A2Y0 
UniProtKBA0A073UAL9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL65123.1};
InterProA0A073UAL9 
PFAMA0A073UAL9 
ProdomA0A073UAL9 
UniProtKBA0A074ICH3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO08175.1};
InterProA0A074ICH3 
PFAMA0A074ICH3 
ProdomA0A074ICH3 
UniProtKBA0A079H025SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY96741.1};
InterProA0A079H025 
PFAMA0A079H025 
ProdomA0A079H025 
UniProtKBA0A080GNN1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN88601.1};
InterProA0A080GNN1 
PFAMA0A080GNN1 
ProdomA0A080GNN1 
UniProtKBA0A0E0U304SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE58185.1};
InterProA0A0E0U304 
PFAMA0A0E0U304 
ProdomA0A0E0U304 
UniProtKBA0A0E1M197SubName: Full=Putative enzyme {ECO:0000313|EMBL:AJF57755.1};
InterProA0A0E1M197 
PFAMA0A0E1M197 
ProdomA0A0E1M197 
UniProtKBA0A0E3N142SubName: Full=UPF0001 protein YggS {ECO:0000313|EMBL:AKA92013.1};
InterProA0A0E3N142 
PFAMA0A0E3N142 
ProdomA0A0E3N142 
UniProtKBA0A0F6MH04SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID63318.1};
InterProA0A0F6MH04 
PFAMA0A0F6MH04 
ProdomA0A0F6MH04 
UniProtKBA0A0H3X7H5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM36449.1};
InterProA0A0H3X7H5 
PFAMA0A0H3X7H5 
ProdomA0A0H3X7H5 
UniProtKBB2P1G2SubName: Full=Alanine racemase family;
InterProB2P1G2 
PFAMB2P1G2 
ProdomB2P1G2 
UniProtKBA0A071DH55SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ40734.1};
InterProA0A071DH55 
PFAMA0A071DH55 
ProdomA0A071DH55 
UniProtKBA0A071AGB4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY58993.1};
InterProA0A071AGB4 
PFAMA0A071AGB4 
ProdomA0A071AGB4 
UniProtKBA0A070SWM0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX21134.1};
InterProA0A070SWM0 
PFAMA0A070SWM0 
ProdomA0A070SWM0 
UniProtKBB3WX25SubName: Full=Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EDX36106.1};
InterProB3WX25 
PFAMB3WX25 
ProdomB3WX25 
UniProtKBB6ZZB0SubName: Full=Pyridoxal phosphate enzyme, YggS family;
InterProB6ZZB0 
PFAMB6ZZB0 
ProdomB6ZZB0 
UniProtKBB7NI14SubName: Full=Putative enzyme;
InterProB7NI14 
PFAMB7NI14 
ProdomB7NI14 
UniProtKBB3I4Y0SubName: Full=Alanine racemase family;
InterProB3I4Y0 
PFAMB3I4Y0 
ProdomB3I4Y0 
UniProtKBA0A026HFQ6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYY81596.1};
InterProA0A026HFQ6 
PFAMA0A026HFQ6 
ProdomA0A026HFQ6 
UniProtKBA0A027YTF5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD89975.1};
InterProA0A027YTF5 
PFAMA0A027YTF5 
ProdomA0A027YTF5 
UniProtKBA0A029LES9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ83491.1};
InterProA0A029LES9 
PFAMA0A029LES9 
ProdomA0A029LES9 
UniProtKBA0A064T7M2SubName: Full=UPF0001 protein yggS {ECO:0000313|EMBL:KDG92487.1};
InterProA0A064T7M2 
PFAMA0A064T7M2 
ProdomA0A064T7M2 
UniProtKBA0A070DKY3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV41531.1};
InterProA0A070DKY3 
PFAMA0A070DKY3 
ProdomA0A070DKY3 
UniProtKBB1LDG0SubName: Full=Alanine racemase family {ECO:0000313|EMBL:ACB19279.1};
InterProB1LDG0 
PFAMB1LDG0 
ProdomB1LDG0