University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A080EEJ7
Original Database ID ref NP_414807.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=ornithine carbamoyltransferase
{eco:0000256|hamap-rule:mf_01109,
e co:0000256|saas:saas00106174};short=otcase
{eco:0000256|hamap-rule:mf ...
Sequence Length 334

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2-334
Protein Length334
Template PDB Code1akmA
Template Region1-333
Sequence Identity87%
E-Value0
GA3411
MPQS2.05631
z-DOPE-1.26
TSVMod MethodMTALL
TSVMod RMSD1.721
TSVMod NO350.949
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1akmornithine transcarbamylase from escherichia coli ; EC: 2.1.3.3 ; PFAM: PF00185 PF02729 ; SCOP: 35252 35253
DBALI1akmA 
CATH3.40.50.1370 Domain: 1akmA01 Rossmann fold (100%)
CATH3.40.50.1370 Domain: 1akmA02 Rossmann fold (100%)
JenaImageLibrary1akm 
Target Sequence
UniProtKBT9VKL2RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProT9VKL2 
PFAMT9VKL2 
ProdomT9VKL2 
UniProtKBM9FSY2RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProM9FSY2 
PFAMM9FSY2 
ProdomM9FSY2 
UniProtKBM2N012RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProM2N012 
PFAMM2N012 
ProdomM2N012 
UniProtKBL4A8X0RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProL4A8X0 
PFAML4A8X0 
ProdomL4A8X0 
UniProtKBI2YD01RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProI2YD01 
PFAMI2YD01 
ProdomI2YD01 
UniProtKBI0ZM17RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProI0ZM17 
PFAMI0ZM17 
ProdomI0ZM17 
UniProtKBF9R6E6RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProF9R6E6 
PFAMF9R6E6 
ProdomF9R6E6 
UniProtKBB1XE15RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProB1XE15 
PFAMB1XE15 
ProdomB1XE15 
UniProtKBA0A080F271RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProA0A080F271 
PFAMA0A080F271 
ProdomA0A080F271 
UniProtKBA0A080EEJ7RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProA0A080EEJ7 
PFAMA0A080EEJ7 
ProdomA0A080EEJ7 
UniProtKBM9K864RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProM9K864 
PFAMM9K864 
ProdomM9K864 
UniProtKBN2KZC3RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProN2KZC3 
PFAMN2KZC3 
ProdomN2KZC3 
UniProtKBN3EQA0RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProN3EQA0 
PFAMN3EQA0 
ProdomN3EQA0 
UniProtKBT9QA48RecName: Full=Ornithine carbamoyltransferase;Short=OTCase;EC=2.1.3.3;
InterProT9QA48 
PFAMT9QA48 
ProdomT9QA48 
UniProtKBQ2MCE9RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProQ2MCE9 
PFAMQ2MCE9 
ProdomQ2MCE9 
UniProtKBP78308RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProP78308 
PFAMP78308 
ProdomP78308 
UniProtKBN4P0F0RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProN4P0F0 
PFAMN4P0F0 
ProdomN4P0F0 
UniProtKBA0A0G3HKC3RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};
InterProA0A0G3HKC3 
PFAMA0A0G3HKC3 
ProdomA0A0G3HKC3 
UniProtKBN4N4Q2RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProN4N4Q2 
PFAMN4N4Q2 
ProdomN4N4Q2 
UniProtKBP06960RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProP06960 
PFAMP06960 
ProdomP06960 
UniProtKBN4N3V3RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProN4N3V3 
PFAMN4N3V3 
ProdomN4N3V3 
UniProtKBN3FM47RecName: Full=Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109
InterProN3FM47 
PFAMN3FM47 
ProdomN3FM47 
UniProtKBF9R6E6RecName: Full=Ornithine carbamoyltransferase 2;Short=OTCase 2;EC=2.1.3.3;
InterProF9R6E6 
PFAMF9R6E6 
ProdomF9R6E6 
UniProtKBA0A3Y1KBR6Ornithine carbamoyltransferase {ECO:0000256|ARBA:ARBA00013007, ECO:0000256|HAMAP-Rule:MF_01109}Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109}EC=2.1.3.3 {ECO:0000256|ARBA:ARBA00013007, ECO:0000256|HAMA
InterProA0A3Y1KBR6 
PFAMA0A3Y1KBR6 
ProdomA0A3Y1KBR6 
UniProtKBA0A7B5IBQ3SubName: Full=Ornithine carbamoyltransferase {ECO:0000313|EMBL:HAJ6405139.1}EC=2.1.3.3 {ECO:0000313|EMBL:HAJ6405139.1}
InterProA0A7B5IBQ3 
PFAMA0A7B5IBQ3 
ProdomA0A7B5IBQ3 
UniProtKBB1XE15RecName: Full=Ornithine carbamoyltransferase 1;Short=OTCase 1;EC=2.1.3.3;
InterProB1XE15 
PFAMB1XE15 
ProdomB1XE15 
UniProtKBQ2MCE9Ornithine carbamoyltransferase 2, chain F
InterProQ2MCE9 
PFAMQ2MCE9 
ProdomQ2MCE9 
UniProtKBI0ZM17SubName: Full=Ornithine carbamoyltransferase 2, chain F;
InterProI0ZM17 
PFAMI0ZM17 
ProdomI0ZM17 
UniProtKBI2YD01SubName: Full=Ornithine carbamoyltransferase;EC=2.1.3.3;
InterProI2YD01 
PFAMI2YD01 
ProdomI2YD01 
UniProtKBP06960RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProP06960 
PFAMP06960 
ProdomP06960 
UniProtKBP06960.4OTC2_ECOLI RecName: Full=Ornithine carbamoyltransferase chain F; AltName: Full=OTCase-2
InterProP06960.4 
PFAMP06960.4 
ProdomP06960.4 
UniProtKBP78308RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProP78308 
PFAMP78308 
ProdomP78308 
UniProtKBQ2MCE9RecName: Full=Ornithine carbamoyltransferase chain F;EC=2.1.3.3;AltName: Full=OTCase-2;
InterProQ2MCE9 
PFAMQ2MCE9 
ProdomQ2MCE9 
RefSeqNP_414807.1 ornithine carbamoyltransferase 2, chain F; CP4-6 prophage [Escherichia coli str. K-12 substr. MG1655]
RefSeqAP_000927.1 ornithine carbamoyltransferase 2, chain F [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001729217.1 CP4-6 prophage; ornithine carbamoyltransferase 2, chain F [Escherichia coli str. K-12 substr. DH10B]
GenPept687671206ornithine carbamoyltransferase chain F
GenPept687675492ornithine carbamoyltransferase chain F
GenPept730583899ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept549811820ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept2506960OTC2_ECOLI RecName: Full=Ornithine carbamoyltransferase chain F; AltName: Full=OTCase-2
GenPept731471628ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept664682709ornithine carbamoyltransferase
GenPept1786469ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept169887732CP4-6 prophage; ornithine carbamoyltransferase 2, chain F
GenPept682117861ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept170079897 CP4-6 prophage; ornithine carbamoyltransferase 2, chain F [Escherichia coli str. K-12 substr. DH10B]
GenPept89107147 ornithine carbamoyltransferase 2, chain F [Escherichia coli str. K-12 substr. W3110]
GenPept167273915Sequence 717 from patent US 7314974
GenPept16128258 ornithine carbamoyltransferase 2, chain F; CP4-6 prophage [Escherichia coli str. K-12 substr. MG1655]
GenPept1552842OTCase
GenPept732685769ornithine carbamoyltransferase
GenPept7427897OWECF ornithine carbamoyltransferase (EC 2.1.3.3) chain F - Escherichia coli
GenPept757003535Sequence 551 from patent US 8883464
GenPept808729275ornithine carbamoyltransferase
GenPept808733687ornithine carbamoyltransferase
GenPept817573635ornithine carbamoyltransferase 2, chain F, CP4-6 prophage
GenPept817577777ornithine carbamoyltransferase 2, chain F, CP4-6 prophage
GenPept85674417ornithine carbamoyltransferase 2, chain F
GenPept827620913ornithine carbamoyltransferase 2, chain F CP4-6 prophage protein
GenPept827617768ornithine carbamoyltransferase 2, chain F CP4-6 prophage protein
GenPept817590198ornithine carbamoyltransferase 2, chain F, CP4-6 prophage
GenPept808720954ornithine carbamoyltransferase
GenPept817586057ornithine carbamoyltransferase 2, chain F, CP4-6 prophage
GenPept808707812ornithine carbamoyltransferase
GenPept802133877ornithine carbamoyltransferase 2, chain F; CP4-6 prophage
GenPept808716585ornithine carbamoyltransferase
GenPept808712173ornithine carbamoyltransferase
GenPept817581916ornithine carbamoyltransferase 2, chain F, CP4-6 prophage
GenPept808699062ornithine carbamoyltransferase
GenPept808703433ornithine carbamoyltransferase
GenBankAAC73376.1 ornithine carbamoyltransferase 2, chain F; CP4-6 prophage [Escherichia coli str. K-12 substr. MG1655]
GenBankACB01439.1 CP4-6 prophage; ornithine carbamoyltransferase 2, chain F [Escherichia coli str. K-12 substr. DH10B]
GenBankAAB08694.1 OTCase [Escherichia coli]