University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P27248
Original Database ID TR GCST_ECOLI
Organism Escherichia coli
Annotation aminomethyltransferase (ec 2.1.2.10)
(glycine cleavage system tde
protein)
Sequence Length 363

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region15-357
Protein Length363
Template PDB Code1pj5A
Template Region472-822
Sequence Identity23%
E-Value3e-64
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1pj5crystal structure of dimethylglycine oxidase of arthrobacter globiformis in complex with acetate
DBALI1pj5A 
CATH3.50.50.60 Domain: 1pj5A01 FAD/NAD(P)-binding domain (45%)
CATH2.40.30.110 Domain: 1pj5A05 Aminomethyltransferase beta-barrel domains (100%)
JenaImageLibrary1pj5 
Target Sequence
UniProtKBP27248Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system TDE protein)
InterProP27248 
PFAMP27248 
ProdomP27248