University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 169404645
Original Database ID GI 169404645
Organism
Annotation a chain a, crystal structure of
yage, a prophage protein belonging
to the dihydr odipicolinic acid
synthase family from e. coli k12
Sequence Length 343

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region32-325
Protein Length343
Template PDB Code3d0cA
Template Region10-299
Sequence Identity23%
E-Value1e-55
GA3411
Datasetnysgxrc_3D0C_708
ModPipe Version
Model Date2008-07-11

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3d0ccrystal structure of dihydrodipicolinate synthase from oceanobacillus iheyensis at 1.9 a resolution
DBALI3d0cA 
CATH3.20.20.70 Domain: 3d0cA00 Aldolase class I (96%)
JenaImageLibrary3d0c 
Target Sequence
PDB2V9DD Chain D, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
PDB2V9DAChain A, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
PDB2V9DBChain B, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
PDB2V9DCChain C, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
PDB2V9DDChain D, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
GenPept169404645A Chain A, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
GenPept169404646B Chain B, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
GenPept169404647C Chain C, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12
GenPept169404648D Chain D, Crystal Structure Of Yage, A Prophage Protein Belonging To The Dihydrodipicolinic Acid Synthase Family From E. Coli K12