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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 328877234
Original Database ID GI 328877235
Organism
Annotation a chain a, crystal structure of
yage, a prophage protein from
e. coli k12 in com plex with kdgal
Sequence Length 298

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-298
Protein Length298
Template PDB Code2v9dA
Template Region12-309
Sequence Identity100%
E-Value0
GA3411
MPQS2.2945
z-DOPE-2.05
TSVMod MethodMTALL
TSVMod RMSD0.159
TSVMod NO351
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2v9dcrystal structure of yage, a prophage protein belonging to the dihydrodipicolinic acid synthase family from e. coli k12
DBALI2v9dA 
JenaImageLibrary2v9d 
Target Sequence
PDB4U4MAChain A, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
PDB4U4MBChain B, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
PDB4U4MDChain D, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
PDB3NEVDChain D, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
PDB3NEVCChain C, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
PDB3NEVBChain B, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
PDB3NEVAChain A, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
PDB4U4MCChain C, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
GenPept906848918A Chain A, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
GenPept906848919B Chain B, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
GenPept906848920C Chain C, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate
GenPept328877234A Chain A, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
GenPept328877237D Chain D, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
GenPept328877236C Chain C, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
GenPept328877235B Chain B, Crystal Structure Of Yage, A Prophage Protein From E. Coli K12 In Complex With Kdgal
GenPept906848921D Chain D, Crystal Structure Of 0.5m Urea Unfolded Yage, A Kdg Aldolase Protein In Complex With Pyruvate