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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 308198396
Original Database ID GI 315583371
Organism
Annotation a chain a, nmr structure in a
membrane environment reveals putative
amyloidogeni c regions of the
sevi precursor peptide pap248-286
Sequence Length 39

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-38
Protein Length39
Template PDB Code2l3hA
Template Region248-285
Sequence Identity100%
E-Value0
GA3410.26
MPQS1.80586
z-DOPE1.83
TSVMod MethodMSALL
TSVMod RMSD7.544
TSVMod NO350.147
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2l3h
DBALI2l3hA 
JenaImageLibrary2l3h 
Target Sequence
PDB2L3HAChain A, Nmr Structure In A Membrane Environment Reveals Putative Amyloidogenic Regions Of The Sevi Precursor Peptide Pap248-286
PDB2L77AChain A, Solution Nmr Structure Of Pap248-286 In 50% Tfe
PDB2L79AChain A, Solution Nmr Structure Of Pap248-286 In 30% Tfe
GenPept308198396A Chain A, Nmr Structure In A Membrane Environment Reveals Putative Amyloidogenic Regions Of The Sevi Precursor Peptide Pap248-286
GenPept315583371A Chain A, Solution Nmr Structure Of Pap248-286 In 50% Tfe
GenPept315583372A Chain A, Solution Nmr Structure Of Pap248-286 In 30% Tfe