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ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link P20138
Original Database ID gi 20381382
Organism Homo sapiens, synthetic construct
Annotation myeloid cell surface antigen cd33
precursor (siglec-3) (gp67)
Sequence Length 364
 

SNP Information

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ResidueAA-Residue
Variants
InterfaceLigandStabilityValidated
rs3987760 F21 FI  
rs17856792 G69 GR   PC
rs2455069 G69 GR   PC X
rs4082929 R202 RW  
9 SNPs found but only 4 displayed. (SNPs in modeled regions)
 

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1vcacrystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 angstroms resolution ; PFAM: PF00047 ; SCOP: 21649 21685
DBALI1vcaA 
CATH2.60.40.10 Domain: 1vcaA01 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1vcaA02 Immunoglobulins (98%)
JenaImageLibrary1vca 
Target Sequence
UniProtKBP20138Myeloid cell surface antigen CD33 precursor (Siglec-3) (gp67)
InterProP20138 
PFAMP20138 
ProdomP20138 
GenPept915757815Sequence 1638 from patent US 9002652
GenPept88178A30521 myeloid cell surface antigen CD33 precursor - human
GenPept757922817Sequence 1638 from patent US 8603752
GenPept649117865CD33, partial
GenPept568527558Sequence 2139 from patent US 8586006
GenPept449699703Sequence 92 from patent US 8372948
GenPept380266788Sequence 4 from patent US 8124069
GenPept331427605Sequence 1638 from patent US 7883858
GenPept123981646CD33 molecule
GenPept123996455CD33 molecule, partial
GenPept20381382CD33 molecule
GenPept217244798Sequence 92 from patent US 7446176
GenPept239653443Sequence 4 from patent US 7527793
GenPept307684838CD33 molecule, partial
GenPept115979CD33_HUMAN MYELOID CELL SURFACE ANTIGEN CD33 PRECURSOR (GP67)
GenBankAAH28152.1 CD33 molecule [Homo sapiens]
GenBankABM82652.1 CD33 molecule [synthetic construct]
GenBankABM85829.1 CD33 molecule [synthetic construct]
UCSCGenomeBrowserP20138