University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76585
Original Database ID TR YPHG_ECOLI
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation uncharacterized protein yphg
Sequence Length 1124

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region544-875
Protein Length1124
Template PDB Code1kt1A
Template Region85-416
Sequence Identity11%
E-Value5e-07
GA3410.39
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1kt1structure of the large fkbp-like protein, fkbp51, involved in steroid receptor complexes ; PFAM: PF00254 PF00515 ; SCOP: 77528 77529 77530
DBALI1kt1A 
CATH3.10.50.40 Domain: 1kt1A01 Chitinase A; domain 3 (41%)
CATH3.10.50.40 Domain: 1kt1A02 Chitinase A; domain 3 (100%)
CATH1.25.40.10 Domain: 1kt1A03 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat (100%)
JenaImageLibrary1kt1 
Target Sequence
UniProtKBD8BUT4SubName: Full=Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFI89599.1};
InterProD8BUT4 
PFAMD8BUT4 
ProdomD8BUT4 
UniProtKBD8BUT4SubName: Full=Tetratricopeptide repeat protein;
InterProD8BUT4 
PFAMD8BUT4 
ProdomD8BUT4 
UniProtKBQ2MAH5Uncharacterized protein yphG
InterProQ2MAH5 
PFAMQ2MAH5 
ProdomQ2MAH5 
UniProtKBP76585Uncharacterized protein yphG
InterProP76585 
PFAMP76585 
ProdomP76585 
RefSeqZP_07186010.1 tetratricopeptide repeat protein [Escherichia coli MS 196-1]
GenPept7452141D65032 hypothetical protein b2549 - Escherichia coli (strain K-12)
GenPept3025268YPHG_ECOLI HYPOTHETICAL 127.3 KDA PROTEIN IN CSIE-GLYA INTERGENIC REGION
GenPept301022083 tetratricopeptide repeat protein [Escherichia coli MS 196-1]
GenPept299881388 tetratricopeptide repeat protein [Escherichia coli MS 196-1]
GenPept1788900orf, hypothetical protein; putative transferase
GenPept16130474 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenBankEFI89599.1 tetratricopeptide repeat protein [Escherichia coli MS 196-1]