University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B3KTU8
Original Database ID GI 193788316
Organism Homo sapiens
Annotation subname: full=cdna flj38770 fis,
clone kidne2016000, highly similar
to epoxide h ydrolase 2 (ec 3.3.2.3);
Sequence Length 490

Dataset Information:

The newest dataset for this sequence was created on 2011-07-03. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region183-479
Protein Length490
Template PDB Code1r3dA
Template Region5-260
Sequence Identity16%
E-Value0
GA3410.78
MPQS0.600222
z-DOPE0.24
TSVMod MethodMTALL
TSVMod RMSD7.606
TSVMod NO350.38
DatasetTB_1r3dA_20091007-94196
ModPipe VersionSVN.r1278
Model Date2010-10-20

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
PharmGKB   PharmGKB data available for EPHX2
Template Structure
PDB1r3dcrystal structure of hypothetical protein vc1974 from vibrio cholerae
DBALI1r3dA 
CATH3.40.50.1820 Domain: 1r3dA00 Rossmann fold (97%)
JenaImageLibrary1r3d 
Target Sequence
SFLD193788316Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBB3KTU8SubName: Full=cDNA FLJ38770 fis, clone KIDNE2016000, highly similar to Epoxide hydrolase 2 (EC 3.3.2.3);
InterProB3KTU8 
PFAMB3KTU8 
ProdomB3KTU8 
UniProtKBB3KTU8SubName: Full=cDNA FLJ38770 fis, clone KIDNE2016000, highly similar to Epoxide hydrolase 2 (EC 3.3.2.3);
InterProB3KTU8 
PFAMB3KTU8 
ProdomB3KTU8 
GenPept193788316unnamed protein product