University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1130674
Original Database ID GI 1130674
Organism Escherichia coli
Annotation fixc, partial
Sequence Length 188

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region5-186
Protein Length188
Template PDB Code2gf3A
Template Region4-229
Sequence Identity29%
E-Value0.039
GA3411
MPQS1.02599
z-DOPE0.81
TSVMod MethodMTALL
TSVMod RMSD18.988
TSVMod NO350.372
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2gf3structure of the complex of monomeric sarcosine with its substrate analogue inhibitor 2-fuoric acid at 1.3 a resolution.
DBALI2gf3A 
CATH3.30.9.10 Domain: 2gf3A02 D-Amino Acid Oxidase, subunit A, domain 2 (53%)
JenaImageLibrary2gf3 
Target Sequence
GenPept1130674fixC, partial
EMBLCAA50799.1