University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1834515
Original Database ID gi 52693921
Organism Homo sapiens
Annotation shc p66
Sequence Length 583

Dataset Information:

The newest dataset for this sequence was created on 2008-11-05. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region111-317
Protein Length583
Template PDB Code1n3hA
Template Region1-207
Sequence Identity100%
E-Value 0
GA3411
MPQS1.35
z-DOPE1
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO351
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1n3hcoupling of folding and binding in the ptb domain of the signaling protein shc
DBALI1n3hA 
CATH2.30.29.30 Domain: 1n3hA00 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) (100%)
JenaImageLibrary1n3h 
Target Sequence
UniProtKBP29353SHC TRANSFORMING PROTEIN
InterProP29353 
PFAMP29353 
ProdomP29353 
RefSeqNP_892113.3 SHC (Src homology 2 domain containing) transforming protein 1 isoform p66Shc [Homo sapiens]
GenPept1834515shc p66
GenPept2827778SHC_HUMAN SHC TRANSFORMING PROTEIN
GenPept52693921 SHC (Src homology 2 domain containing) transforming protein 1 isoform p66Shc [Homo sapiens]
GenPept568493243Sequence 4 from patent US 8586320
EMBLCAA70977.1 
UCSCGenomeBrowserP29353